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Merge pull request #143 from EcoJulia/rr/metadata
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@richardreeve
richardreeve authored Jul 15, 2024
2 parents 3d536a7 + a06cd66 commit d92d261
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8 changes: 8 additions & 0 deletions .github/workflows/testing.yaml
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Expand Up @@ -30,8 +30,16 @@ jobs:
- 'release'
arch:
- x64
- arm64
experimental:
- false
exclude:
- os: macOS-latest
arch: x64
- os: ubuntu-latest
arch: arm64
- os: windows-latest
arch: arm64
fail-fast: false
steps:
- name: Checkout code
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22 changes: 13 additions & 9 deletions .zenodo.json
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@@ -1,31 +1,35 @@
{
"title": "EcoSISTEM.jl - Ecosystem Simulation through Integrated Species-Trait Environment Modelling",
"title": "EcoSISTEM.jl",
"description": "Package for running dynamic ecosystem simulations in Julia",
"upload_type": "software",
"creators": [
{
"affiliation": "Biomathematics and Statstics Scotland",
"name": "Harris, Claire",
"orcid": "0000-0003-0852-2340"
"orcid": "0000-0003-0852-2340",
"affiliation": "Biomathematics and Statistics Scotland",
"ror": "03jwrz939"
},
{
"affiliation": "University of Glasgow",
"name": "Reeve, Richard",
"orcid": "0000-0003-2589-8091"
"orcid": "0000-0003-2589-8091",
"affiliation": "University of Glasgow",
"ror": "00vtgdb53"
}
],
"access_right": "open",
"license": "LGPL-3.0+",
"license": "LGPL-3.0-or-later",
"related_identifiers": [
{
"scheme": "url",
"identifier": "https://github.com/EcoJulia/EcoSISTEM.jl",
"relation": "isIdenticalTo"
"relation": "isOriginalFormOf"
}
],
"keywords": [
"simulation",
"EcoJulia",
"biodiversity",
"ecology",
"julia",
"ecology"
"simulation"
]
}
304 changes: 304 additions & 0 deletions LICENSE
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165 changes: 0 additions & 165 deletions LICENSE.md
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26 changes: 22 additions & 4 deletions Project.toml
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@@ -1,7 +1,10 @@
name = "EcoSISTEM"
uuid = "ed2dc23b-ada4-5fdb-a26f-56368a14ad8f"
authors = ["Claire Harris <[email protected]>", "Richard Reeve <[email protected]>"]
version = "0.2.3"
author = ["Claire Harris", "Richard Reeve <[email protected]>"]
version = "0.2.4"

[license]
SPDX = "LGPL-3.0-or-later"

[deps]
ArchGDAL = "c9ce4bd3-c3d5-55b8-8973-c0e20141b8c3"
Expand Down Expand Up @@ -76,7 +79,7 @@ MPI = "0.17.2, 0.18, 0.19, 0.20"
Markdown = "1.9"
Measures = "0.3.1"
Missings = "0.4.5, 1.0"
NetCDF = "0.10, 0.11"
NetCDF = "0.10, 0.11, 0.12"
OnlineStats = "1.5.8"
Optim = "0.18, 0.19, 0.20, 0.21, 0.22, 1"
Phylo = "0.4.18, 0.5"
Expand All @@ -86,7 +89,7 @@ Printf = "1.9"
PyCall = "1"
REPL = "1.9"
Random = "1.9"
RasterDataSources = "0.5.6"
RasterDataSources = "0.5.6, 0.6"
RecipesBase = "1"
SHA = "0.7"
SpatialEcology = "0.9"
Expand All @@ -98,6 +101,21 @@ Unitful = "1.7"
p7zip_jll = "17"
julia = "1.9"

[[authors]]
name = "Claire Harris"
orcid = "0000-0003-0852-2340"
email = "[email protected]"

[[authors.affiliation]]
ror = "03jwrz939"
[[authors]]
name = "Richard Reeve"
orcid = "0000-0003-2589-8091"
email = "[email protected]"

[[authors.affiliation]]
ror = "00vtgdb53"

[extras]
DataPipeline = "9ced6f0a-eb77-43a8-bbd1-bbf3031b0d12"
MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195"
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66 changes: 66 additions & 0 deletions codemeta.json
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@@ -0,0 +1,66 @@
{
"@context": "https://w3id.org/codemeta/3.0",
"type": "SoftwareSourceCode",
"applicationCategory": "ecology",
"codeRepository": "https://github.com/EcoJulia/EcoSISTEM.jl",
"dateCreated": "2016-11-29",
"dateModified": "2024-07-16",
"datePublished": "2021-04-20",
"description": "Package for running dynamic ecosystem simulations in Julia",
"downloadUrl": "https://github.com/EcoJulia/EcoSISTEM.jl/archive/refs/tags/v0.2.4.tar.gz",
"keywords": [
"EcoJulia",
"biodiversity",
"ecology",
"julia",
"simulation"
],
"license": "https://spdx.org/licenses/LGPL-3.0-or-later",
"name": "EcoSISTEM.jl",
"operatingSystem": [
"Linux",
"Windows",
"macOS"
],
"programmingLanguage": "julia",
"version": "v0.2.4",
"codemeta:contIntegration": {
"id": "https://github.com/EcoJulia/EcoSISTEM.jl/actions/workflows/testing.yaml"
},
"continuousIntegration": "https://github.com/EcoJulia/EcoSISTEM.jl/actions/workflows/testing.yaml",
"developmentStatus": "active",
"issueTracker": "https://github.com/EcoJulia/EcoSISTEM.jl/issues",
"identifier": "10.5281/zenodo.4705053",
"referencePublication": "https://arxiv.org/abs/1911.12257",
"readme": "https://github.com/EcoJulia/EcoSISTEM.jl/blob/main/README.md",
"buildInstructions": "https://github.com/EcoJulia/EcoSISTEM.jl/blob/main/README.md",
"author": [
{
"type": "Person",
"givenName": "Claire",
"familyName": "Harris",
"id": "https://orcid.org/0000-0003-0852-2340",
"affiliation": [
{
"type": "Organization",
"name": "Biomathematics and Statistics Scotland",
"identifier": "https://ror.org/03jwrz939"
}
]
},
{
"type": "Person",
"givenName": "Richard",
"familyName": "Reeve",
"email": "[email protected]",
"id": "https://orcid.org/0000-0003-2589-8091",
"affiliation": [
{
"type": "Organization",
"name": "University of Glasgow",
"identifier": "https://ror.org/00vtgdb53"
}
]
}
]
}
13 changes: 13 additions & 0 deletions docs/Project.toml
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[deps]
DataStructures = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
EcoSISTEM = "ed2dc23b-ada4-5fdb-a26f-56368a14ad8f"
Git = "d7ba0133-e1db-5d97-8f8c-041e4b3a1eb2"
HTTP = "cd3eb016-35fb-5094-929b-558a96fad6f3"
JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
JuliaFormatter = "98e50ef6-434e-11e9-1051-2b60c6c9e899"
Pkg = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
TOML = "fa267f1f-6049-4f14-aa54-33bafae1ed76"
YAML = "ddb6d928-2868-570f-bddf-ab3f9cf99eb6"
2 changes: 2 additions & 0 deletions docs/make.jl
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@@ -1,3 +1,5 @@
# SPDX-License-Identifier: LGPL-3.0-or-later

using Documenter
using EcoSISTEM

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@richardreeve
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Registration pull request created: JuliaRegistries/General/111140

Tip: Release Notes

Did you know you can add release notes too? Just add markdown formatted text underneath the comment after the text
"Release notes:" and it will be added to the registry PR, and if TagBot is installed it will also be added to the
release that TagBot creates. i.e.

@JuliaRegistrator register

Release notes:

## Breaking changes

- blah

To add them here just re-invoke and the PR will be updated.

Tagging

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if the Julia TagBot GitHub Action is installed, or can be done manually through the github interface, or via:

git tag -a v0.2.4 -m "<description of version>" d92d261d9f872fbec7daef982efadbb0c138e982
git push origin v0.2.4

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