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1.2.0
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@aaronmussig aaronmussig released this 29 May 05:44
· 410 commits to master since this release
1.2.0
c2ef504

Bug fixes:

  • (#241) Moved GTDB-Tk entry point to main.py instead of bin/gtdbtk to support execution in some HPC systems (gtdbtk will still be aliased on install).
  • (#251) Allow parsing of FastANI v1.0 output files. However, a warning will be displayed to update FastANI.
  • (#254) Fixed an issue where --scratch_dir would fail, and not clean-up the mmap file.

Features:

  • (#242) Added the decorate command allowing the de novo workflow to be run
  • (#244) Added the infer_rank method which established the taxonomic ranks of internal nodes of user trees based on RED
  • (#248) If the identify command is run on the same directory, genomes which were already processed will be skipped.
  • (#248) Improved pplacer output with running the classify command
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