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Merge pull request #2 from younes-elhachi/master
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changing min_pks printing and adding "data" folder with spline file
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@jonwright
jonwright authored Apr 20, 2017
2 parents 0431053 + f512960 commit 8601141
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Showing 2 changed files with 226 additions and 11 deletions.
16 changes: 5 additions & 11 deletions ImageD11/indexing.py
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Original file line number Diff line number Diff line change
Expand Up @@ -326,8 +326,7 @@ def assigntorings(self):
# Report on assignments
ds=np.array(self.ds)
print "Ring ( h, k, l) Mult total indexed to_index ubis peaks_per_ubi"
expeectedubis = []
expectedpeaks =[]
minpks = 0
# try reverse order instead
for j in range(len(dsr))[::-1]:
ind = np.compress( np.equal(self.ra,j), np.arange(self.ra.shape[0]) )
Expand All @@ -340,22 +339,17 @@ def assigntorings(self):
try:
expected_orients = int(180./self.omega_fullrange * self.na[j]/float(Mult))
expected_npks = int(self.omega_fullrange/180. * Mult)
expeectedubis.append(expected_orients)
expectedpeaks.append(expected_npks)
minpks += expected_npks
except:
expected_orients = 'N/A'
expected_npks = 'N/A'
print "Ring %-3d (%3d,%3d,%3d) %3d %5d %5d %5d %5s %2s"%(\
j,h[0],h[1],h[2],Mult,
self.na[j],n_indexed,n_to_index,expected_orients,expected_npks)
try:
best2r = [expeectedubis[::-1].index(x) for x in sorted(expeectedubis)[-2:]]
minpks2r = expectedpeaks[::-1][best2r[0]]+expectedpeaks[::-1][best2r[1]]
print 'In case you use ring %d and ring %d for the indexing,'%(best2r[1],best2r[0])
print 'you might set the min_peaks to something between % d and % d\n'%(int(0.65*minpks2r),int(0.9*minpks2r))
if minpks > 0:
print '\nmin_pks: - Current --> %3d'%(self.minpks)
print ' - Expected --> %3d\n'%(minpks)

except:
raise
# We will only attempt to index g-vectors which have been assigned
# to hkl rings (this gives a speedup if there
# are a lot of spare peaks
Expand Down
221 changes: 221 additions & 0 deletions data/frelon21_mar16.spline
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Original file line number Diff line number Diff line change
@@ -0,0 +1,221 @@
SPATIAL DISTORTION SPLINE INTERPOLATION COEFFICIENTS

VALID REGION
0.0000000E+00 0.0000000E+00 0.2048000E+04 0.2048000E+04

GRID SPACING, X-PIXEL SIZE, Y-PIXEL SIZE
0.5000000E+03 0.4720000E+02 0.4720000E+02

X-DISTORTION
27 27
0.0000000E+00 0.0000000E+00 0.0000000E+00 0.0000000E+00 0.1146572E+03
0.1993727E+03 0.2868665E+03 0.3735395E+03 0.4713448E+03 0.5700426E+03
0.6696967E+03 0.7669751E+03 0.8580632E+03 0.9484092E+03 0.1037400E+04
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0.2048000E+04 0.2048000E+04
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Y-DISTORTION
23 25
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