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Fix config description of assembly name ordering for synteny data adapters #4631

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merged 1 commit into from
Oct 31, 2024
Merged

Fix config description of assembly name ordering for synteny data adapters #4631

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2 changes: 1 addition & 1 deletion plugins/comparative-adapters/src/ChainAdapter/configSchema.ts
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Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@ const ChainAdapter = ConfigurationSchema(
type: 'stringArray',
defaultValue: [],
description:
'Target is the first value in the array, query is the second',
'Array of assembly names to use for this file. The query assembly name is the first value in the array, target assembly name is the second',
},
/**
* #slot
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7 changes: 5 additions & 2 deletions plugins/comparative-adapters/src/DeltaAdapter/configSchema.ts
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Expand Up @@ -16,7 +16,7 @@ const DeltaAdapter = ConfigurationSchema(
type: 'stringArray',
defaultValue: [],
description:
'Array of assembly names to use for this file. The target assembly name is the first value in the array, query assembly name is the second',
'Array of assembly names to use for this file. The query assembly name is the first value in the array, target assembly name is the second',
},
/**
* #slot
Expand All @@ -41,7 +41,10 @@ const DeltaAdapter = ConfigurationSchema(
*/
deltaLocation: {
type: 'fileLocation',
defaultValue: { uri: '/path/to/file.delta', locationType: 'UriLocation' },
defaultValue: {
uri: '/path/to/file.delta',
locationType: 'UriLocation',
},
},
},
{ explicitlyTyped: true },
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2 changes: 1 addition & 1 deletion plugins/comparative-adapters/src/MashMapAdapter/configSchema.ts
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Expand Up @@ -15,7 +15,7 @@ const MashMapAdapter = ConfigurationSchema(
type: 'stringArray',
defaultValue: [],
description:
'Target is the first value in the array, query is the second',
'Array of assembly names to use for this file. The query assembly name is the first value in the array, target assembly name is the second',
},

/**
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2 changes: 1 addition & 1 deletion plugins/comparative-adapters/src/PAFAdapter/configSchema.ts
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Expand Up @@ -15,7 +15,7 @@ const PAFAdapter = ConfigurationSchema(
type: 'stringArray',
defaultValue: [],
description:
'Array of assembly names to use for this file. The target assembly name is the first value in the array, query assembly name is the second',
'Array of assembly names to use for this file. The query assembly name is the first value in the array, target assembly name is the second',
},
/**
* #slot
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2 changes: 1 addition & 1 deletion plugins/comparative-adapters/src/PairwiseIndexedPAFAdapter/configSchema.ts
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Expand Up @@ -16,7 +16,7 @@ const PairwiseIndexedPAFAdapter = ConfigurationSchema(
type: 'stringArray',
defaultValue: [],
description:
'Array of assembly names to use for this file. The target assembly name is the first value in the array, query assembly name is the second',
'Array of assembly names to use for this file. The query assembly name is the first value in the array, target assembly name is the second',
},
/**
* #slot
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