Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fix!: Add support for checking before/after transcript boundaries #381

Merged
merged 2 commits into from
Dec 3, 2024

Conversation

jarbesfeld
Copy link
Contributor

closes #380

This checks to see if a coordinate occurs before or after the transcript range when selecting the adjacent exon. Previously, this would iterate through the entire exon list, leading to very large offsets and incorrect adjacent exon selection

@jarbesfeld jarbesfeld added bug Something isn't working priority:high High priority labels Dec 3, 2024
@jarbesfeld jarbesfeld requested a review from korikuzma December 3, 2024 15:27
@jarbesfeld jarbesfeld self-assigned this Dec 3, 2024
@jarbesfeld jarbesfeld requested a review from korikuzma December 3, 2024 18:32
@jarbesfeld jarbesfeld merged commit 252c7c1 into main Dec 3, 2024
12 checks passed
@jarbesfeld jarbesfeld deleted the issue-380 branch December 3, 2024 19:08
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working priority:high High priority
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Update exon selection offset to consider cases where breakpoint occurs before or after a transcript
2 participants