Use protocol and origin from window #1633
Workflow file for this run
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| # This workflow will install Python dependencies, run tests, lint, and perform static code analysis | |
| # All unit tests found in the tests/ directory are run. | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Run tests | |
| on: push | |
| jobs: | |
| linting-flake8: | |
| name: Lint Python with flake8 | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout github repo | |
| uses: actions/checkout@v2 | |
| - name: Install flake8 | |
| run: | | |
| python -m pip install flake8 | |
| - name: Run lint with flake8 | |
| run: | | |
| flake8 src --show-source --count --statistics --max-line-length=120 | |
| linting-js: | |
| name: Lint Front-end application | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| working-directory: ./visualisation | |
| steps: | |
| - uses: actions/setup-node@v3 | |
| with: | |
| node-version: 16.x | |
| - uses: actions/checkout@v3 | |
| - name: Install dependencies | |
| run: npm ci | |
| - name: Run linting | |
| run: npm run lint | |
| unit-tests: | |
| name: Run unit tests with pytest | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout github repo including lfs files | |
| uses: actions/checkout@v2 | |
| with: | |
| lfs: true | |
| - name: Install package dependencies | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: environment.yml | |
| # only cache environment | |
| cache-environment: true | |
| cache-downloads: false | |
| - run: | | |
| conda info | |
| conda list | |
| conda config --show-sources | |
| conda config --show | |
| - name: Create .env file with API keys | |
| env: | |
| ENV_BASE64: ${{ secrets.ENV_BASE64 }} | |
| run: | | |
| echo import .env file from secrets and regenerate the file | |
| echo $ENV_BASE64 | base64 -d > .env | |
| - name: Run tests with pytest | |
| env: | |
| TEST_DATABASE_INTEGRATION: "false" | |
| run: | | |
| pytest | |
| sonarcloud: | |
| name: Run static-code analysis on SonarCloud | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout github repo | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 | |
| - name: SonarCloud Scan | |
| uses: SonarSource/sonarcloud-github-action@master | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }} |