1. Installation

Installation

As usual it is recommend that you use a virtual environment for this installation. You can install the napari plugin of NanoPyx via [pip]:

pip install napari-nanopyx

It should install the plugin as well as the NanoPyx library together with napari. It is recommended that you perform this installation in a clean environment, using either python venv or conda.

Notes for Mac M1/2 users

You might need to install pyqt separately as it is not currently distributed together with the installation of napari-nanopyx. The recommended way of installing should be by using conda and running:

conda install pyqt

Afterwards, you should be able to just run "napari" in your terminal and napari's interface should load.