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seqkit 2.8.1 #168248

Merged
merged 2 commits into from
Apr 7, 2024
Merged

seqkit 2.8.1 #168248

merged 2 commits into from
Apr 7, 2024

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Created by brew bump


Created with brew bump-formula-pr.

release notes
### Changelog
  • SeqKit v2.8.1 - 2024-04-07 Github Releases (by Release)
    • seqkit sana:
      • Add support for FASTQ files with IDs in the separator (+, 3rd) lines.. #446, #429, #408
    • seqkit subseq:
      • Add some docs to show how to keep the original order of sequences when extracting with BED: compress the input FASTA file. #451

Links

OS Arch File, 中国镜像 Download Count
Linux 32-bit seqkit_linux_386.tar.gz,
中国镜像
Github Releases (by Asset)
Linux 64-bit seqkit_linux_amd64.tar.gz,
中国镜像
Github Releases (by Asset)
Linux arm64 seqkit_linux_arm64.tar.gz,
中国镜像
Github Releases (by Asset)
macOS 64-bit seqkit_darwin_amd64.tar.gz,
中国镜像
Github Releases (by Asset)
macOS arm64 seqkit_darwin_arm64.tar.gz,
中国镜像
Github Releases (by Asset)
Windows 32-bit seqkit_windows_386.exe.tar.gz,
中国镜像
Github Releases (by Asset)
Windows 64-bit seqkit_windows_amd64.exe.tar.gz,
中国镜像
Github Releases (by Asset)

Notes

  • please open an issuse to request binaries for other platforms.
  • run seqkit version to check update !!!
  • run seqkit genautocomplete to update shell autocompletion script !!!

Please cite:

  1. Wei Shen*, Botond Sipos, and Liuyang Zhao. 2024. SeqKit2: A Swiss Army Knife for Sequence and Alignment Processing. iMeta e191. doi:10.1002/imt2.191.
  2. Wei Shen, Shuai Le, Yan Li*, and Fuquan Hu*. SeqKit: a cross-platform and ultrafast toolkit for FASTA/Q file manipulation.
    PLOS ONE. doi:10.1371/journal.pone.0163962.

@github-actions github-actions bot added go Go use is a significant feature of the PR or issue bump-formula-pr PR was created using `brew bump-formula-pr` labels Apr 7, 2024
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github-actions bot commented Apr 7, 2024

🤖 An automated task has requested bottles to be published to this PR.

@github-actions github-actions bot added the CI-published-bottle-commits The commits for the built bottles have been pushed to the PR branch. label Apr 7, 2024
@BrewTestBot BrewTestBot enabled auto-merge April 7, 2024 10:40
@BrewTestBot BrewTestBot added this pull request to the merge queue Apr 7, 2024
Merged via the queue into master with commit f2465c0 Apr 7, 2024
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@BrewTestBot BrewTestBot deleted the bump-seqkit-2.8.1 branch April 7, 2024 10:57
@github-actions github-actions bot added the outdated PR was locked due to age label May 8, 2024
@github-actions github-actions bot locked as resolved and limited conversation to collaborators May 8, 2024
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