bazel_5: fix CLang 16 Werror-s on darwin

Fixing `bazel_5` after #234710

Error example
https://hydra.nixos.org/build/241240612/nixlog/1
```
external/com_google_absl/absl/meta/type_traits.h:560:8: error: builtin __has_trivial_assign is deprecated; use __is_trivially_assignable instead [-Werror,-Wdeprecated-builtins]
      (__has_trivial_assign(ExtentsRemoved) || !kIsCopyOrMoveAssignable) &&
```

Similar to #269297, and remaining `bazel_4` is WIP for another PR

pkgs/development/tools/build-managers/bazel/bazel_5/default.nix

@@ -166,6 +166,8 @@ stdenv.mkDerivation rec {
   inherit src;
   inherit sourceRoot;
   patches = [
+    ./upb-clang16.patch
+
     # On Darwin, the last argument to gcc is coming up as an empty string. i.e: ''
     # This is breaking the build of any C target. This patch removes the last
     # argument if it's found to be an empty string.
@@ -364,6 +366,8 @@ stdenv.mkDerivation rec {
       # libcxx includes aren't added by libcxx hook
       # https://github.com/NixOS/nixpkgs/pull/41589
       export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -isystem ${lib.getDev libcxx}/include/c++/v1"
+      # for CLang 16 compatibility in external/{absl,upb} dependencies and in execlog
+      export NIX_CFLAGS_COMPILE+=" -Wno-deprecated-builtins -Wno-gnu-offsetof-extensions -Wno-implicit-function-declaration"
 
       # don't use system installed Xcode to run clang, use Nix clang instead
       sed -i -E "s;/usr/bin/xcrun (--sdk macosx )?clang;${stdenv.cc}/bin/clang $NIX_CFLAGS_COMPILE $(bazelLinkFlags) -framework CoreFoundation;g" \

pkgs/development/tools/build-managers/bazel/bazel_5/upb-clang16.patch

@@ -0,0 +1,83 @@
+diff --git a/distdir_deps.bzl b/distdir_deps.bzl
+index 9068f50537..b3f45e8653 100644
+--- a/distdir_deps.bzl
++++ b/distdir_deps.bzl
+@@ -110,6 +110,8 @@ DIST_DEPS = {
+     "protocolbuffers": {
+         "archive": "2de300726a1ba2de9a468468dc5ff9ed17a3215f.tar.gz",
+         "sha256": "6a5f67874af66b239b709c572ac1a5a00fdb1b29beaf13c3e6f79b1ba10dc7c4",
++        "patches": ["//:upb-clang16.patch"],
++        "patch_args": ["-p1"],
+         "urls": [
+             "https://mirror.bazel.build/github.com/protocolbuffers/upb/archive/2de300726a1ba2de9a468468dc5ff9ed17a3215f.tar.gz",
+             "https://github.com/protocolbuffers/upb/archive/2de300726a1ba2de9a468468dc5ff9ed17a3215f.tar.gz",
+@@ -131,6 +133,7 @@ DIST_DEPS = {
+         "patches": [
+             "//third_party/grpc:grpc_1.41.0.patch",
+             "//third_party/grpc:grpc_1.41.0.win_arm64.patch",
++            "//:grpc-upb-clang16.patch",
+         ],
+         "used_in": [
+             "additional_distfiles",
+diff --git a/grpc-upb-clang16.patch b/grpc-upb-clang16.patch
+new file mode 100644
+index 0000000000..69194099db
+--- /dev/null
++++ b/grpc-upb-clang16.patch
+@@ -0,0 +1,13 @@
++diff -r -u a/bazel/grpc_deps.bzl b/bazel/grpc_deps.bzl
++--- a/bazel/grpc_deps.bzl
+++++ b/bazel/grpc_deps.bzl
++@@ -340,6 +340,8 @@
++             name = "upb",
++             sha256 = "6a5f67874af66b239b709c572ac1a5a00fdb1b29beaf13c3e6f79b1ba10dc7c4",
++             strip_prefix = "upb-2de300726a1ba2de9a468468dc5ff9ed17a3215f",
+++            patches = ["//:upb-clang16.patch"],
+++            patch_args = ["-p1"],
++             urls = [
++                 "https://storage.googleapis.com/grpc-bazel-mirror/github.com/protocolbuffers/upb/archive/2de300726a1ba2de9a468468dc5ff9ed17a3215f.tar.gz",
++                 "https://github.com/protocolbuffers/upb/archive/2de300726a1ba2de9a468468dc5ff9ed17a3215f.tar.gz",
++
++diff -r -u a/third_party/upb/bazel/build_defs.bzl b/third_party/upb/bazel/build_defs.bzl
++--- a/third_party/upb/bazel/build_defs.bzl	2021-09-25 04:33:41.000000000 +0200
+++++ b/third_party/upb/bazel/build_defs.bzl	2023-11-22 22:27:39.421459688 +0100
++@@ -34,6 +34,7 @@
++         "-Wextra",
++         # "-Wshorten-64-to-32",  # not in GCC (and my Kokoro images doesn't have Clang)
++         "-Werror",
+++        "-Wno-gnu-offsetof-extensions",
++         "-Wno-long-long",
++         # copybara:strip_end
++     ],
++@@ -48,6 +49,7 @@
++         "-pedantic",
++         "-Werror=pedantic",
++         "-Wall",
+++        "-Wno-gnu-offsetof-extensions",
++         "-Wstrict-prototypes",
++         # GCC (at least) emits spurious warnings for this that cannot be fixed
++         # without introducing redundant initialization (with runtime cost):
+diff --git a/upb-clang16.patch b/upb-clang16.patch
+new file mode 100644
+index 0000000000..f81855181f
+--- /dev/null
++++ upb-clang16.patch
+@@ -0,0 +1,18 @@
++--- a/bazel/build_defs.bzl
+++++ b/bazel/build_defs.bzl
++@@ -34,6 +34,7 @@
++         "-Wextra",
++         # "-Wshorten-64-to-32",  # not in GCC (and my Kokoro images doesn't have Clang)
++         "-Werror",
+++        "-Wno-gnu-offsetof-extensions",
++         "-Wno-long-long",
++         # copybara:strip_end
++     ],
++@@ -48,6 +49,7 @@
++         "-pedantic",
++         "-Werror=pedantic",
++         "-Wall",
+++        "-Wno-gnu-offsetof-extensions",
++         "-Wstrict-prototypes",
++         # GCC (at least) emits spurious warnings for this that cannot be fixed
++         # without introducing redundant initialization (with runtime cost):