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Patch: Bumping up memory for octopus due to job failure.
tests #263: Commit b85e923 pushed by skchronicles
January 21, 2025 15:06 59s main
January 21, 2025 15:06 59s
pages build and deployment
pages-build-deployment #23: by github-pages bot
January 16, 2025 19:57 26s gh-pages
January 16, 2025 19:57 26s
Chore: updating docs for input section.
tests #262: Commit 5bf3b40 pushed by skchronicles
January 16, 2025 19:57 59s main
January 16, 2025 19:57 59s
Chore: updating docs for input section.
docs #23: Commit 5bf3b40 pushed by skchronicles
January 16, 2025 19:57 39s main
January 16, 2025 19:57 39s
Create missing tmp directory for PAVE
tests #261: Commit 843de01 pushed by skchronicles
January 9, 2025 18:58 58s main
January 9, 2025 18:58 58s
Adding PAVE filtering for SAGE tumor-only samples
tests #260: Commit d8f1216 pushed by skchronicles
January 8, 2025 21:39 53s main
January 8, 2025 21:39 53s
December 19, 2024 19:44 54s
Using latest version of deepsomatic, 1.8.0
tests #258: Commit 89a0159 pushed by skchronicles
December 18, 2024 21:29 55s main
December 18, 2024 21:29 55s
Adding deepsomatic, hmftools sage, clairs-to and removing strelka
tests #257: Commit 7dd9b9d pushed by skchronicles
December 13, 2024 21:46 1m 1s main
December 13, 2024 21:46 1m 1s
December 6, 2024 17:07 1m 7s
November 14, 2024 18:51 57s
Adding clairS-to regions option
tests #254: Commit ebca284 pushed by skchronicles
November 13, 2024 22:33 59s main
November 13, 2024 22:33 59s
November 12, 2024 23:22 58s
Adding allocation information for new deepsomatic rules
tests #252: Commit 1267ed4 pushed by skchronicles
November 12, 2024 22:49 54s main
November 12, 2024 22:49 54s
Breaking up deepsomatic into its constituent steps
tests #251: Commit 57b666c pushed by skchronicles
November 5, 2024 20:25 58s main
November 5, 2024 20:25 58s
Decreasing lscratch allocation information for deepsomatic
tests #250: Commit d145b39 pushed by skchronicles
November 1, 2024 20:18 58s main
November 1, 2024 20:18 58s
October 31, 2024 18:59 54s
October 30, 2024 20:47 54s
October 28, 2024 17:04 1m 4s
Removing extra octopus filter that results in lower recall
tests #246: Commit 288c45c pushed by skchronicles
October 25, 2024 15:17 1m 4s main
October 25, 2024 15:17 1m 4s
Bumping up deepsomatic local disk allocation
tests #245: Commit 9f1c3ff pushed by skchronicles
October 23, 2024 02:17 58s main
October 23, 2024 02:17 58s
Adding new docker image with bwa-mem2 wrapper
tests #244: Commit 0925a6f pushed by skchronicles
October 21, 2024 20:09 59s main
October 21, 2024 20:09 59s
Updating adding bwa-mem2 wrapper and increasing patch version
tests #243: Commit e4aadb3 pushed by skchronicles
October 21, 2024 18:17 55s main
October 21, 2024 18:17 55s
October 21, 2024 17:51 58s
Adding deepsomatic variant caller for WGS TN-pairs
tests #241: Commit 1a8a20b pushed by skchronicles
October 18, 2024 22:01 54s main
October 18, 2024 22:01 54s