chore: add channel distribution plots

Generated using `pynml-plotchan`.
OpenSourceBrain · Mar 13, 2024 · 4525bd9 · 4525bd9
1 parent edfaa50
commit 4525bd9
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Showing 15 changed files with 1 addition and 1 deletion.
diff --git a/NeuroML2/analyse_chans.sh b/NeuroML2/analyse_chans.sh
@@ -1,4 +1,3 @@
-
 pynml-channelanalysis it.channel.nml ca.channel.nml \
                       na.channel.nml kca.channel.nml \
                       km.channel.nml kv.channel.nml \
@@ -9,3 +8,4 @@ pynml-channelanalysis it.channel.nml ca.channel.nml \
                       km.channel.nml kv.channel.nml \
                       -caConc 4.3e-4 -temperature 34 -html -md -datSuffix '.34'
 
+pynml-plotchan -nogui "./L23_NoHotSpot.cell.nml"
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_ca.ion.png b/NeuroML2/channel_summary/L23_NoHotSpot_ca.ion.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_ca_ion_vs_dist.png b/NeuroML2/channel_summary/L23_NoHotSpot_ca_ion_vs_dist.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_it.ion.png b/NeuroML2/channel_summary/L23_NoHotSpot_it.ion.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_it_ion_vs_dist.png b/NeuroML2/channel_summary/L23_NoHotSpot_it_ion_vs_dist.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_kca.ion.png b/NeuroML2/channel_summary/L23_NoHotSpot_kca.ion.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_kca_ion_vs_dist.png b/NeuroML2/channel_summary/L23_NoHotSpot_kca_ion_vs_dist.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_km.ion.png b/NeuroML2/channel_summary/L23_NoHotSpot_km.ion.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_km_ion_vs_dist.png b/NeuroML2/channel_summary/L23_NoHotSpot_km_ion_vs_dist.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_kv.ion.png b/NeuroML2/channel_summary/L23_NoHotSpot_kv.ion.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_kv_ion_vs_dist.png b/NeuroML2/channel_summary/L23_NoHotSpot_kv_ion_vs_dist.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_na.ion.png b/NeuroML2/channel_summary/L23_NoHotSpot_na.ion.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_na_ion_vs_dist.png b/NeuroML2/channel_summary/L23_NoHotSpot_na_ion_vs_dist.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_pas.ion.png b/NeuroML2/channel_summary/L23_NoHotSpot_pas.ion.png
diff --git a/NeuroML2/channel_summary/L23_NoHotSpot_pas_ion_vs_dist.png b/NeuroML2/channel_summary/L23_NoHotSpot_pas_ion_vs_dist.png