Add licence

.gitignore

@@ -43,3 +43,4 @@ generatedNeuroML2
 /NeuroML2/notebooks/iv_L23_NoHotSpot.net.nml
 /NeuroML2/*.json
 /NeuroML2/*_netpyne.py
+/NeuroML2/temp

CITATION.md

@@ -0,0 +1,13 @@
+## Citing this model
+
+The software in this repository is provided under the terms of the [software license](LICENSE) included with it. 
+
+If you use this model in your research, we respectfully ask you to cite:
+
+**The original publication upon which this model is based**
+
+   - Dendritic spikes enhance stimulus selectivity in cortical neurons in vivo, Smith, Smith, Branco & Häusser, Nature 2013.
+
+**The latest release of this Open Source Brain repository**
+
+   - This link should provide a DOI/citation for the latest version released: https://www.zenodo.org/badge/latestdoi/30966621. If you would like us to make a new release, please [open an issue](../../issues). 

LICENSE

@@ -0,0 +1,30 @@
+The MIT License (MIT)
+
+Copyright © 2018 Open Source Brain developers
+    http://www.opensourcebrain.org/
+
+All rights reserved. This program and the accompanying materials
+are made available under the terms of the MIT License
+which accompanies this distribution, and is available at
+http://opensource.org/licenses/MIT
+
+Contributors:
+    https://github.com/orgs/OpenSourceBrain/people
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,
+DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR
+OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE
+USE OR OTHER DEALINGS IN THE SOFTWARE.

NeuroML2/L23_One.net.nml

@@ -8,13 +8,6 @@ This NeuroML 2 file was generated by OpenCortex v0.0.8 using:
     </notes>
     <property tag="Python random seed" value="1234"/>
     <include href="L23_NoHotSpot.cell.nml"></include>
-    <include href="ca.channel.nml"></include>
-    <include href="it.channel.nml"></include>
-    <include href="kca.channel.nml"></include>
-    <include href="km.channel.nml"></include>
-    <include href="kv.channel.nml"></include>
-    <include href="na.channel.nml"></include>
-    <include href="pas.channel.nml"></include>
     <pulseGenerator id="Stim_0" delay="50ms" duration="250ms" amplitude="0.500000nA"/>
     <network id="L23_One" type="networkWithTemperature" temperature="35degC">
         <population id="L23_pop" component="L23_NoHotSpot" size="1" type="populationList">

NeuroML2/LEMS_L23_One.xml

@@ -14,14 +14,6 @@
     <Include file="Networks.xml"/>
     <Include file="Simulation.xml"/>
 
-    <Include file="L23_NoHotSpot.cell.nml"/>
-    <Include file="ca.channel.nml"/>
-    <Include file="it.channel.nml"/>
-    <Include file="kca.channel.nml"/>
-    <Include file="km.channel.nml"/>
-    <Include file="kv.channel.nml"/>
-    <Include file="na.channel.nml"/>
-    <Include file="pas.channel.nml"/>
     <Include file="L23_One.net.nml"/>
 
     <Simulation id="Sim_L23_One" length="400ms" step="0.025ms" target="L23_One" seed="12345">  <!-- Note seed: ensures same random numbers used every run -->

NeuroML2/singleCompAllChans.net.nml

@@ -1,12 +1,5 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <neuroml xmlns="http://www.neuroml.org/schema/neuroml2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.neuroml.org/schema/neuroml2  https://raw.github.com/NeuroML/NeuroML2/development/Schemas/NeuroML2/NeuroML_v2beta3.xsd" id="net">
-  <include href="na.channel.nml"/>
-  <include href="km.channel.nml"/>
-  <include href="kv.channel.nml"/>
-  <include href="ca.channel.nml"/>
-  <include href="kca.channel.nml"/>
-  <include href="it.channel.nml"/>
-  <include href="pas.channel.nml"/>
   <include href="singleCompAllChans.cell.nml"/>
 
   <pulseGenerator id="iclamp0" delay="100 ms" duration="100 ms" amplitude="-0.01 nA"/>

README.md

@@ -6,4 +6,11 @@ Model from: [Dendritic spikes enhance stimulus selectivity in cortical neurons i
 
 [![Build Status](https://travis-ci.org/OpenSourceBrain/SmithEtAl2013-L23DendriticSpikes.svg)](https://travis-ci.org/OpenSourceBrain/SmithEtAl2013-L23DendriticSpikes)
 
+[![DOI](https://www.zenodo.org/badge/30966621.svg)](https://www.zenodo.org/badge/latestdoi/30966621)
+
+### Reusing this model
+
+The code in this repository is provided under the terms of the [software license](LICENSE) included with it. If you use this model in your research, we respectfully ask you to cite the references outlined in the [CITATION](CITATION.md) file.
+
+