fixed reading TIFF real valued intensities in range 0-1 as integer 0 #541
Workflow file for this run
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| name: Build And Run Test on Windows | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| workflow_dispatch: | |
| env: | |
| BUILD_TYPE: Release | |
| jobs: | |
| Build_and_Run_GTest: | |
| name: Build and Run GoogleTest | |
| runs-on: windows-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: recursive | |
| - uses: ilammy/msvc-dev-cmd@v1 | |
| name: Add MSVS Path | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: anaconda-client-env | |
| python-version: 3.8 | |
| channels: conda-forge | |
| auto-activate-base: false | |
| - name: Install Conda Dependencies | |
| run: | | |
| conda install mamba | |
| mamba install --file ${{github.workspace}}/ci-utils/envs/conda_cpp.txt | |
| - name: Configure CMake | |
| run: cmake -B ${{github.workspace}} -DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} -DBUILD_CLI=ON -DRUN_GTEST=ON -DUSEARROW=ON -DCMAKE_PREFIX_PATH=$CONDA_PREFIX -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX | |
| - name: Build | |
| run: cmake --build ${{github.workspace}} --config ${{env.BUILD_TYPE}} --parallel 2 | |
| - name: Run GTest Suite | |
| working-directory: ${{github.workspace}} | |
| # Execute tests. | |
| run: ./tests/${{env.BUILD_TYPE}}/runAllTests.exe | |
| Build_and_Run_PyTest: | |
| name: Build and Run PyTest | |
| runs-on: windows-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: recursive | |
| - uses: ilammy/msvc-dev-cmd@v1 | |
| name: Add MSVS Path | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: anaconda-client-env | |
| python-version: 3.8 | |
| channels: conda-forge | |
| auto-activate-base: false | |
| - name: Install Conda Dependencies | |
| working-directory: ${{github.workspace}} | |
| run: | | |
| conda install mamba | |
| mamba install pytest requests --file ./ci-utils/envs/conda_cpp.txt --file ./ci-utils/envs/conda_py.txt | |
| - name: Install Nyxus | |
| working-directory: ${{github.workspace}} | |
| run: CMAKE_ARGS="-DCMAKE_PREFIX_PATH=$CONDA_PREFIX -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX -DUSEARROW=ON" python -m pip install . -vv | |
| - name: Run PyTest | |
| working-directory: ${{github.workspace}} | |
| run: python -m pytest tests/python/ |