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Include Swiss BioPic images into RNAcentral #579

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blakesweeney opened this issue May 12, 2022 · 0 comments
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Include Swiss BioPic images into RNAcentral #579

blakesweeney opened this issue May 12, 2022 · 0 comments
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blakesweeney commented May 12, 2022

SwissBioPics (https://www.swissbiopics.org/) are a way of visualizing the localization of molecules. We already have this information displayed in our GO tables, but these are not the easiest way to display these annotations. We should include their diagrams into RNAcentral.

The details of how to include the images are in: https://www.npmjs.com/package/@swissprot/swissbiopics-visualizer. But to me it looks like we could add:

<script type="module" src="https://www.swissbiopics.org/static/swissbiopics.js"></script>
<sib-swissbiopics-sl taxid="9606" gos="GO:0005634"></sib-swissbiopics-sl>

for https://rnacentral.org/rna/URS0000A77400/9606. The GO id used there is actually already part of the search index in the part_of field. We can also pull this data from the database if needed.

carlosribas added a commit that referenced this issue Jun 16, 2022
carlosribas added a commit that referenced this issue Jun 16, 2022
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carlosribas added a commit that referenced this issue Jun 22, 2022
* #579 - Add swissbiopics library
* #579 - Remove tooltip text
* #579 - Use all ids from part_of
* #579 - Show SwissBioPics in a new section
* #579 - Change background color in sidebar
* #579 - Minor change
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