coverage: remove nvidia dir #349
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: run-coverage | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| schedule: | |
| - cron: '0 8 * * *' #every day at 8am | |
| jobs: | |
| runCoverage: | |
| # See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| compiler: [g++] | |
| language: ['cpp'] | |
| build_type: [Debug] | |
| # Permissions needed for coverage paste | |
| permissions: | |
| #security-events: write | |
| pull-requests: write | |
| steps: | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update -yq | |
| sudo apt-get install -yq cmake | |
| sudo apt-get install -yq doxygen | |
| sudo apt-get install -yq graphviz | |
| sudo apt-get install -yq libhdf5-mpi-dev | |
| sudo apt-get install -yq lcov | |
| ## Build | |
| - name: Build meshfields | |
| env: | |
| BRANCH_NAME: ${{ github.head_ref || github.ref_name }} | |
| PROCS: 4 | |
| id: build | |
| shell: bash | |
| run: | | |
| # debug info | |
| lcov --version | |
| lsb_release -a | |
| echo "github.workspace ${{github.workspace}}" | |
| workDir=${{github.workspace}}/meshfields | |
| mkdir -p $workDir | |
| echo "MESHFIELDS_WORK_DIR=$(echo $workDir)" >> $GITHUB_ENV | |
| echo "workDir $workDir" | |
| # kokkos | |
| git clone -b develop https://github.com/kokkos/kokkos.git ${workDir}/kokkos | |
| kkbdir=${workDir}/build-kokkos | |
| cmake -S ${workDir}/kokkos -B $kkbdir \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DCMAKE_CXX_COMPILER=g++ \ | |
| -DKokkos_ENABLE_SERIAL=ON \ | |
| -DKokkos_ENABLE_OPENMP=off \ | |
| -DKokkos_ENABLE_DEBUG=on \ | |
| -DCMAKE_INSTALL_PREFIX=$kkbdir/install | |
| cmake --build $kkbdir --target install -j ${PROCS} | |
| # cabana | |
| git clone https://github.com/ECP-copa/Cabana.git ${workDir}/cabana | |
| cabbdir=${workDir}/build-cab | |
| cmake -S ${workDir}/cabana -B $cabbdir \ | |
| -DCMAKE_BUILD_TYPE="Debug" \ | |
| -DCMAKE_CXX_COMPILER=g++ \ | |
| -DKokkos_ROOT=$kkbdir/install \ | |
| -DCabana_ENABLE_MPI=OFF \ | |
| -DCabana_ENABLE_CAJITA=OFF \ | |
| -DCabana_ENABLE_TESTING=OFF \ | |
| -DCabana_ENABLE_EXAMPLES=OFF \ | |
| -DCMAKE_INSTALL_PREFIX=$cabbdir/install | |
| cmake --build $cabbdir -j ${PROCS} --target install | |
| # omegah | |
| git clone https://github.com/SCOREC/omega_h.git ${workDir}/omegah | |
| ohbdir=${workDir}/build-omegah | |
| cmake -S ${workDir}/omegah -B $ohbdir \ | |
| -DCMAKE_INSTALL_PREFIX=$ohbdir/install \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DBUILD_SHARED_LIBS=OFF \ | |
| -DBUILD_TESTING=off \ | |
| -DOmega_h_USE_Kokkos=on \ | |
| -DKokkos_PREFIX=$kkbdir/install | |
| cmake --build $ohbdir -j ${PROCS} --target install | |
| # meshfields | |
| git clone -b $BRANCH_NAME https://github.com/SCOREC/meshfields.git ${workDir}/meshfields | |
| mfbdir=${workDir}/build-meshfields | |
| cmake -S ${workDir}/meshfields -B $mfbdir \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DOmega_h_ROOT=$ohbdir/install \ | |
| -DKokkos_ROOT=$kkbdir/install \ | |
| -DCabana_ROOT=$cabbdir/install \ | |
| -DmeshFields_ENABLE_COVERAGE_BUILD=ON \ | |
| -DLCOV_SYSTEM_EXCLUDE_PATHS="/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi/ompi/mpi/cxx/*\;/usr/include/*" | |
| pushd $mfbdir | |
| make -j ${PROCS} | |
| make coverage -j ${PROCS} | |
| popd | |
| # convert lcov to cobertura and exclude dependencies | |
| pip install lcov_cobertura | |
| lcov_cobertura ${mfbdir}/coverage.info -e meshfields.build-kokkos.install.include -e meshfields.build-omegah.install.include | |
| #Uploads coverage directory with lcov generated HTML | |
| - name: Upload lcov report | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: coverage | |
| path: ${{github.workspace}}/meshfields/build-meshFields/coverage | |
| # Generate a report readable from console ------------------------------------- | |
| - name: Code Coverage Summary Report | |
| uses: irongut/[email protected] | |
| with: | |
| filename: coverage.xml | |
| format: markdown | |
| output: both | |
| - name: Add Coverage PR Comment | |
| uses: marocchino/sticky-pull-request-comment@v2 | |
| if: github.event_name == 'pull_request' | |
| with: | |
| recreate: true | |
| path: code-coverage-results.md |