This repository has been archived by the owner on Aug 21, 2018. It is now read-only.
NGI-RNAseq v1.0.2
A couple of tweaks to help the pipeline in production:
- Trimming FastQ files and intermediate BAM files now not saved by default
- This is configurable in the config or with
--saveTrimmed
/--saveAlignedIntermediates
- This is configurable in the config or with
- featureCounts merge process uses
.collect()
for better consistency