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@Sun-lab

Sun Lab

Dr. Wei Sun's lab at Fred Hutch

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  1. asSeq asSeq Public

    allele-specific sequencing data analysis pipeline

    C++ 8 1

  2. asSeq_pipelines asSeq_pipelines Public

    pipelines for using eQTL mapping using ASE

    HTML 2

  3. gtex_AnVIL gtex_AnVIL Public

    process GTEx data at AnVIL cloud space

    R

  4. ideas ideas Public

    Individual level Differential Expression Analysis for Single cells

    R 23 4

  5. PEPPRMINT PEPPRMINT Public

    PEPPRMINT: PEPtide PResentation using a MIxture model and Neural neTwork

    HTML 1

Repositories

Showing 10 of 31 repositories
  • SMASH Public

    Clustering somatic mutations to infer intra-tumor heterogeneity 😄

    Sun-lab/SMASH’s past year of commit activity
    HTML 6 GPL-3.0 0 0 0 Updated Feb 9, 2025
  • STpath Public

    Spatially resolved Transcriptomics and pathology imaging data

    Sun-lab/STpath’s past year of commit activity
    R 1 0 0 0 Updated Jan 14, 2025
  • DePTH Public

    DePTH provides neural network models for sequence-based TCR and HLA association prediction

    Sun-lab/DePTH’s past year of commit activity
    PureBasic 1 MIT 0 0 0 Updated Jan 10, 2025
  • ideas_pipeline Public
    Sun-lab/ideas_pipeline’s past year of commit activity
    HTML 9 MIT 1 2 0 Updated Dec 11, 2024
  • conditional_TCR_prediction Public

    Use TCR to predict infection history, while conditioning on HLA

    Sun-lab/conditional_TCR_prediction’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Nov 25, 2024
  • IT-predictor Public

    genomic predictor of patient response to cancer immunotherapy

    Sun-lab/IT-predictor’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Nov 5, 2024
  • DePTH_pipeline Public

    Pipeline for DePTH draft

    Sun-lab/DePTH_pipeline’s past year of commit activity
    HTML 2 MIT 0 0 0 Updated Sep 21, 2024
  • PEPPRMINT Public

    PEPPRMINT: PEPtide PResentation using a MIxture model and Neural neTwork

    Sun-lab/PEPPRMINT’s past year of commit activity
    HTML 0 MIT 1 2 0 Updated Aug 30, 2024
  • SDAN Public

    Supervised Deep learning with gene Annotation

    Sun-lab/SDAN’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Aug 16, 2024
  • asSeq Public

    allele-specific sequencing data analysis pipeline

    Sun-lab/asSeq’s past year of commit activity
    C++ 8 1 0 0 Updated Mar 12, 2024
View all repositories

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