Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Added Translator Fugu release notes #155

Merged
merged 1 commit into from
Jul 26, 2024
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
27 changes: 27 additions & 0 deletions releases/TranslatorFuguJuly2024.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,27 @@
# NameRes Translator "Fugu" July 2024 Release
- Babel: [2024jul13](https://stars.renci.org/var/babel_outputs/2024jul13/)
([Babel Translator July 2024 Release](https://github.com/TranslatorSRI/Babel/blob/master/releases/TranslatorFuguJuly2024.md))
- NameRes: [v1.3.14](https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.14)

Next release: _None as yet_

## New features
* None.

## Babel updates (from Babel Translator "Fugu" July 2024 Release)
* [Feature] Added manual disease concords, and used that to do a better job of combining opioid use disorder and alcohol use disorder.
* [Feature] Moved ensembl_datasets_to_skip into the config file.
* [Bugfix] Eliminated preferred prefix overrides in Babel; we now trust the preferred prefixes from the Biolink Model.
* [Bugfix] DrugChemical conflation generation now removes CURIEs that can't be normalized.
* [Bugfix] Replaced http://nihilism.com/ with http://example.org/ as a base IRI.
* [Bugfix] Updated mappings from Reactome types to Biolink types.
* [Update] Updated Biolink from 4.1.6 to 4.2.1.
* [Update] Updated UMLS from 2023AB to 2024AA.
* [Update] Updated RxNorm from 03042024 to 07012024.
* [Update] Updated PANTHER_Sequence_Classification from PTHR18.0_human to PTHR19.0_human.
* [Update] Updated PANTHER pathways from SequenceAssociationPathway3.6.7.txt to SequenceAssociationPathway3.6.8.txt.

## Releases since [Translator May 2024](./TranslatorMay2024.md)
* [1.3.14](https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.14): Forgot to increment version number in
previous release.
* [1.3.13](https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.13): Added release notes for Translator May 2024.
2 changes: 1 addition & 1 deletion releases/TranslatorMay2024.md
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
- Babel: [2024mar24](https://stars.renci.org/var/babel_outputs/2024mar24/) (Babel Translator May 2024 Release)
- NameRes: [v1.3.12](https://github.com/TranslatorSRI/NameResolution/releases/tag/v1.3.12)

Next release: _None as yet_
Next release: [Translator "Fugu" July 2024](TranslatorFuguJuly2024.md)

## New features
* Solr database now has two additional fields for each clique:
Expand Down
Loading