v3.3.0 #47

rernst · 2021-07-21T12:08:40Z

Features

CLI: sample / panel qc, reviewed in Feature/cli panel qc #44
Add panel summary to all panel pages, reviewed in Feature/panel summary, solves #40 #42
Gene search on sample page, reviewed in Add gene search form to sample page. #45

Catch UnicodeEncodeError in gene parsing. Fix Create (custom) panel crashes on 'special' character #41
Fix imports and prints for python3
Check panel name and return error if it contains a version number.

Feature/panel summary, solves #40

Feature/cli panel qc

Add gene search form to sample page.

Merge dev to release v3.3.0 branch

ExonCov/templates/panel_new.html

ExonCov/templates/sample_panel.html

ExonCov/views.py

ExonCov/cli.py

ExonCov/forms.py

FiniDG

all comments are clearly answered. no further comments.

ExonCov/cli.py

rernst added 20 commits June 8, 2021 11:23

Fix imports and prints for python3

786cab0

Catch UnicodeEncodeError in gene parsing. Fix #41

90b4268

Typos

eb6cbae

Add panel summary to normal gene panels

ae7ce1d

Update based on feedback

f99559a

Update QC text

c78bc50

Update QC text

d417cf6

Enforce panel names without version

396098e

Merge branch 'develop' into feature/panel_summary

0ca3711

Merge pull request #42 from UMCUGenetics/feature/panel_summary

bbbf3ca

Feature/panel summary, solves #40

WIP, proof of concept.

0f4f7ba

Multi sample support and query panel by name.

e893785

Add optional sample id output to ImportBam

25d3ad3

Round calculated 15x panel cov

a379797

Changes based on review comments.

514bbaf

Merge pull request #44 from UMCUGenetics/feature/cli_panel_qc

e49f1ce

Feature/cli panel qc

Add gene search form to sample page.

1b018ab

Merge pull request #45 from UMCUGenetics/feature/sample_gene_search

3e67acf

Add gene search form to sample page.

Merge pull request #46 from UMCUGenetics/develop

99b3f68

Merge dev to release v3.3.0 branch

Update email.

1f26382