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Get README from bids toolkit #201

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merged 2 commits into from
Jun 8, 2023
Merged

Get README from bids toolkit #201

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arnaudbore Jun 8, 2023
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Merge branch 'master' into get_readme_from_bids_toolkit
arnaudbore Jun 8, 2023
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10 changes: 7 additions & 3 deletions dcm2bids/cli/dcm2bids_scaffold.py
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Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@

from dcm2bids.utils.io import write_txt
from dcm2bids.utils.args import add_overwrite_arg, assert_dirs_empty
from dcm2bids.utils.utils import DEFAULT
from dcm2bids.utils.utils import DEFAULT, run_shell_command
from dcm2bids.utils.scaffold import bids_starter_kit


Expand Down Expand Up @@ -64,8 +64,12 @@ def main():
bids_starter_kit.participants_tsv)

# README
write_txt(opj(args.output_dir, "README"),
bids_starter_kit.README)
try:
run_shell_command(['wget', '-q', '-O', opj(args.output_dir, "README"),
'https://github.com/bids-standard/bids-starter-kit/blob/main/templates/README.MD'])
except:
write_txt(opj(args.output_dir, "README"),
bids_starter_kit.README)


if __name__ == "__main__":
Expand Down