Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Circuit Browser graph layout issues #1179

Closed
Robbie1977 opened this issue Sep 6, 2021 · 6 comments · Fixed by #1182
Closed

Circuit Browser graph layout issues #1179

Robbie1977 opened this issue Sep 6, 2021 · 6 comments · Fixed by #1182
Assignees
Labels

Comments

@Robbie1977
Copy link
Contributor

We have a few examples where the current process is causing the graph to be overly complex

@Robbie1977
Copy link
Contributor Author

Robbie1977 commented Sep 6, 2021

KCab-p_R (FlyEM-HB:1108545472) (VFB_jrchjvri) -> aSP-g1_R (FlyEM-HB:949534412) (VFB_jrchk82q). 2 paths. Min weight 10

image

WITH "VFB_jrchjvri" as a, "VFB_jrchk82q" AS b
MATCH (source:Neuron:has_neuron_connectivity {short_form: a}), (target:Neuron:has_neuron_connectivity {short_form: b})
CALL gds.beta.shortestPath.yens.stream({
nodeQuery: 'MATCH (n:Neuron:has_neuron_connectivity) RETURN id(n) AS id',
relationshipQuery: 'MATCH (a:Neuron:has_neuron_connectivity)-[r:synapsed_to]->(b:Neuron:has_neuron_connectivity) WHERE exists(r.weight) AND r.weight[0] >= 10 RETURN id(a) AS source, id(b) AS target, type(r) as type, 5000-r.weight[0] as weight_p',
sourceNode: id(source),
targetNode: id(target),
k: 2,  
relationshipWeightProperty: 'weight_p',  relationshipTypes: ['*'],  path: true}) YIELD index, sourceNode, targetNode, nodeIds, path WITH * ORDER BY index DESC RETURN *

image

@Robbie1977
Copy link
Contributor Author

Query results from v2-dev:

{
   "results":[
      {
         "columns":[
            "root",
            "pp",
            "p",
            "fr",
            "source",
            "target",
            "maxHops",
            "relationshipY"
         ],
         "data":[
            {
               "row":[
                  "VFB_jrchjvri",
                  [
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjvri",
                           "curie":"VFB:jrchjvri",
                           "short_form":"VFB_jrchjvri",
                           "label_rdfs":[
                              "KCab-p_R (FlyEM-HB:1108545472)"
                           ],
                           "sl":"KCab4p_R_4FlyEM4HB511085454724",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"KCab4p_R_4FlyEM4HB511085454724",
                           "label":"KCab-p_R (FlyEM-HB:1108545472)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              64
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjrhd",
                           "curie":"VFB:jrchjrhd",
                           "short_form":"VFB_jrchjrhd",
                           "label_rdfs":[
                              "APL_R (FlyEM-HB:425790257)"
                           ],
                           "sl":"APL_R_4FlyEM4HB54257902574",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"APL_R_4FlyEM4HB54257902574",
                           "label":"APL_R (FlyEM-HB:425790257)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjrhd",
                           "curie":"VFB:jrchjrhd",
                           "short_form":"VFB_jrchjrhd",
                           "label_rdfs":[
                              "APL_R (FlyEM-HB:425790257)"
                           ],
                           "sl":"APL_R_4FlyEM4HB54257902574",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"APL_R_4FlyEM4HB54257902574",
                           "label":"APL_R (FlyEM-HB:425790257)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              20
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0f8",
                           "curie":"VFB:jrchk0f8",
                           "short_form":"VFB_jrchk0f8",
                           "label_rdfs":[
                              "MBON20(y1y2)_R (FlyEM-HB:792368888)"
                           ],
                           "sl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "comment":[
                              "tracing status-Traced, cropped-False"
                           ],
                           "qsl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "label":"MBON20(y1y2)_R (FlyEM-HB:792368888)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0f8",
                           "curie":"VFB:jrchk0f8",
                           "short_form":"VFB_jrchk0f8",
                           "label_rdfs":[
                              "MBON20(y1y2)_R (FlyEM-HB:792368888)"
                           ],
                           "sl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "comment":[
                              "tracing status-Traced, cropped-False"
                           ],
                           "qsl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "label":"MBON20(y1y2)_R (FlyEM-HB:792368888)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              34
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk5pt",
                           "curie":"VFB:jrchk5pt",
                           "short_form":"VFB_jrchk5pt",
                           "label_rdfs":[
                              "SLP234_R (FlyEM-HB:424379864)"
                           ],
                           "sl":"SLP234_R_4FlyEM4HB54243798644",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"SLP234_R_4FlyEM4HB54243798644",
                           "label":"SLP234_R (FlyEM-HB:424379864)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk5pt",
                           "curie":"VFB:jrchk5pt",
                           "short_form":"VFB_jrchk5pt",
                           "label_rdfs":[
                              "SLP234_R (FlyEM-HB:424379864)"
                           ],
                           "sl":"SLP234_R_4FlyEM4HB54243798644",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"SLP234_R_4FlyEM4HB54243798644",
                           "label":"SLP234_R (FlyEM-HB:424379864)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              12
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk82q",
                           "curie":"VFB:jrchk82q",
                           "short_form":"VFB_jrchk82q",
                           "label_rdfs":[
                              "aSP-g1_R (FlyEM-HB:949534412)"
                           ],
                           "sl":"aSP4g1_R_4FlyEM4HB59495344124",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"aSP4g1_R_4FlyEM4HB59495344124",
                           "label":"aSP-g1_R (FlyEM-HB:949534412)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjvri",
                           "curie":"VFB:jrchjvri",
                           "short_form":"VFB_jrchjvri",
                           "label_rdfs":[
                              "KCab-p_R (FlyEM-HB:1108545472)"
                           ],
                           "sl":"KCab4p_R_4FlyEM4HB511085454724",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"KCab4p_R_4FlyEM4HB511085454724",
                           "label":"KCab-p_R (FlyEM-HB:1108545472)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              33
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0ed",
                           "curie":"VFB:jrchk0ed",
                           "short_form":"VFB_jrchk0ed",
                           "label_rdfs":[
                              "MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)"
                           ],
                           "sl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "label":"MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)",
                           "qsl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0ed",
                           "curie":"VFB:jrchk0ed",
                           "short_form":"VFB_jrchk0ed",
                           "label_rdfs":[
                              "MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)"
                           ],
                           "sl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "label":"MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)",
                           "qsl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              71
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjz4w",
                           "curie":"VFB:jrchjz4w",
                           "short_form":"VFB_jrchjz4w",
                           "label_rdfs":[
                              "LHCENT6_R (FlyEM-HB:5813068669)"
                           ],
                           "sl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "label":"LHCENT6_R (FlyEM-HB:5813068669)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjz4w",
                           "curie":"VFB:jrchjz4w",
                           "short_form":"VFB_jrchjz4w",
                           "label_rdfs":[
                              "LHCENT6_R (FlyEM-HB:5813068669)"
                           ],
                           "sl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "label":"LHCENT6_R (FlyEM-HB:5813068669)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              19
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk5pt",
                           "curie":"VFB:jrchk5pt",
                           "short_form":"VFB_jrchk5pt",
                           "label_rdfs":[
                              "SLP234_R (FlyEM-HB:424379864)"
                           ],
                           "sl":"SLP234_R_4FlyEM4HB54243798644",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"SLP234_R_4FlyEM4HB54243798644",
                           "label":"SLP234_R (FlyEM-HB:424379864)"
                        }
                     ]
                  ],
                  [
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjvri",
                           "curie":"VFB:jrchjvri",
                           "short_form":"VFB_jrchjvri",
                           "label_rdfs":[
                              "KCab-p_R (FlyEM-HB:1108545472)"
                           ],
                           "sl":"KCab4p_R_4FlyEM4HB511085454724",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"KCab4p_R_4FlyEM4HB511085454724",
                           "label":"KCab-p_R (FlyEM-HB:1108545472)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              64
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjrhd",
                           "curie":"VFB:jrchjrhd",
                           "short_form":"VFB_jrchjrhd",
                           "label_rdfs":[
                              "APL_R (FlyEM-HB:425790257)"
                           ],
                           "sl":"APL_R_4FlyEM4HB54257902574",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"APL_R_4FlyEM4HB54257902574",
                           "label":"APL_R (FlyEM-HB:425790257)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjvri",
                           "curie":"VFB:jrchjvri",
                           "short_form":"VFB_jrchjvri",
                           "label_rdfs":[
                              "KCab-p_R (FlyEM-HB:1108545472)"
                           ],
                           "sl":"KCab4p_R_4FlyEM4HB511085454724",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"KCab4p_R_4FlyEM4HB511085454724",
                           "label":"KCab-p_R (FlyEM-HB:1108545472)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              35
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjrhd",
                           "curie":"VFB:jrchjrhd",
                           "short_form":"VFB_jrchjrhd",
                           "label_rdfs":[
                              "APL_R (FlyEM-HB:425790257)"
                           ],
                           "sl":"APL_R_4FlyEM4HB54257902574",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"APL_R_4FlyEM4HB54257902574",
                           "label":"APL_R (FlyEM-HB:425790257)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjrhd",
                           "curie":"VFB:jrchjrhd",
                           "short_form":"VFB_jrchjrhd",
                           "label_rdfs":[
                              "APL_R (FlyEM-HB:425790257)"
                           ],
                           "sl":"APL_R_4FlyEM4HB54257902574",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"APL_R_4FlyEM4HB54257902574",
                           "label":"APL_R (FlyEM-HB:425790257)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              20
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0f8",
                           "curie":"VFB:jrchk0f8",
                           "short_form":"VFB_jrchk0f8",
                           "label_rdfs":[
                              "MBON20(y1y2)_R (FlyEM-HB:792368888)"
                           ],
                           "sl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "comment":[
                              "tracing status-Traced, cropped-False"
                           ],
                           "qsl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "label":"MBON20(y1y2)_R (FlyEM-HB:792368888)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjrhd",
                           "curie":"VFB:jrchjrhd",
                           "short_form":"VFB_jrchjrhd",
                           "label_rdfs":[
                              "APL_R (FlyEM-HB:425790257)"
                           ],
                           "sl":"APL_R_4FlyEM4HB54257902574",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"APL_R_4FlyEM4HB54257902574",
                           "label":"APL_R (FlyEM-HB:425790257)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              35
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0f8",
                           "curie":"VFB:jrchk0f8",
                           "short_form":"VFB_jrchk0f8",
                           "label_rdfs":[
                              "MBON20(y1y2)_R (FlyEM-HB:792368888)"
                           ],
                           "sl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "comment":[
                              "tracing status-Traced, cropped-False"
                           ],
                           "qsl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "label":"MBON20(y1y2)_R (FlyEM-HB:792368888)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0f8",
                           "curie":"VFB:jrchk0f8",
                           "short_form":"VFB_jrchk0f8",
                           "label_rdfs":[
                              "MBON20(y1y2)_R (FlyEM-HB:792368888)"
                           ],
                           "sl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "comment":[
                              "tracing status-Traced, cropped-False"
                           ],
                           "qsl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "label":"MBON20(y1y2)_R (FlyEM-HB:792368888)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              34
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk5pt",
                           "curie":"VFB:jrchk5pt",
                           "short_form":"VFB_jrchk5pt",
                           "label_rdfs":[
                              "SLP234_R (FlyEM-HB:424379864)"
                           ],
                           "sl":"SLP234_R_4FlyEM4HB54243798644",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"SLP234_R_4FlyEM4HB54243798644",
                           "label":"SLP234_R (FlyEM-HB:424379864)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0f8",
                           "curie":"VFB:jrchk0f8",
                           "short_form":"VFB_jrchk0f8",
                           "label_rdfs":[
                              "MBON20(y1y2)_R (FlyEM-HB:792368888)"
                           ],
                           "sl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "comment":[
                              "tracing status-Traced, cropped-False"
                           ],
                           "qsl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "label":"MBON20(y1y2)_R (FlyEM-HB:792368888)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              10
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk5pt",
                           "curie":"VFB:jrchk5pt",
                           "short_form":"VFB_jrchk5pt",
                           "label_rdfs":[
                              "SLP234_R (FlyEM-HB:424379864)"
                           ],
                           "sl":"SLP234_R_4FlyEM4HB54243798644",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"SLP234_R_4FlyEM4HB54243798644",
                           "label":"SLP234_R (FlyEM-HB:424379864)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk5pt",
                           "curie":"VFB:jrchk5pt",
                           "short_form":"VFB_jrchk5pt",
                           "label_rdfs":[
                              "SLP234_R (FlyEM-HB:424379864)"
                           ],
                           "sl":"SLP234_R_4FlyEM4HB54243798644",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"SLP234_R_4FlyEM4HB54243798644",
                           "label":"SLP234_R (FlyEM-HB:424379864)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              12
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk82q",
                           "curie":"VFB:jrchk82q",
                           "short_form":"VFB_jrchk82q",
                           "label_rdfs":[
                              "aSP-g1_R (FlyEM-HB:949534412)"
                           ],
                           "sl":"aSP4g1_R_4FlyEM4HB59495344124",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"aSP4g1_R_4FlyEM4HB59495344124",
                           "label":"aSP-g1_R (FlyEM-HB:949534412)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjvri",
                           "curie":"VFB:jrchjvri",
                           "short_form":"VFB_jrchjvri",
                           "label_rdfs":[
                              "KCab-p_R (FlyEM-HB:1108545472)"
                           ],
                           "sl":"KCab4p_R_4FlyEM4HB511085454724",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"KCab4p_R_4FlyEM4HB511085454724",
                           "label":"KCab-p_R (FlyEM-HB:1108545472)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              33
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0ed",
                           "curie":"VFB:jrchk0ed",
                           "short_form":"VFB_jrchk0ed",
                           "label_rdfs":[
                              "MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)"
                           ],
                           "sl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "label":"MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)",
                           "qsl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjvri",
                           "curie":"VFB:jrchjvri",
                           "short_form":"VFB_jrchjvri",
                           "label_rdfs":[
                              "KCab-p_R (FlyEM-HB:1108545472)"
                           ],
                           "sl":"KCab4p_R_4FlyEM4HB511085454724",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"KCab4p_R_4FlyEM4HB511085454724",
                           "label":"KCab-p_R (FlyEM-HB:1108545472)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              4
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0ed",
                           "curie":"VFB:jrchk0ed",
                           "short_form":"VFB_jrchk0ed",
                           "label_rdfs":[
                              "MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)"
                           ],
                           "sl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "label":"MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)",
                           "qsl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0ed",
                           "curie":"VFB:jrchk0ed",
                           "short_form":"VFB_jrchk0ed",
                           "label_rdfs":[
                              "MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)"
                           ],
                           "sl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "label":"MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)",
                           "qsl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              71
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjz4w",
                           "curie":"VFB:jrchjz4w",
                           "short_form":"VFB_jrchjz4w",
                           "label_rdfs":[
                              "LHCENT6_R (FlyEM-HB:5813068669)"
                           ],
                           "sl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "label":"LHCENT6_R (FlyEM-HB:5813068669)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0ed",
                           "curie":"VFB:jrchk0ed",
                           "short_form":"VFB_jrchk0ed",
                           "label_rdfs":[
                              "MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)"
                           ],
                           "sl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "label":"MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)",
                           "qsl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              1
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjz4w",
                           "curie":"VFB:jrchjz4w",
                           "short_form":"VFB_jrchjz4w",
                           "label_rdfs":[
                              "LHCENT6_R (FlyEM-HB:5813068669)"
                           ],
                           "sl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "label":"LHCENT6_R (FlyEM-HB:5813068669)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjz4w",
                           "curie":"VFB:jrchjz4w",
                           "short_form":"VFB_jrchjz4w",
                           "label_rdfs":[
                              "LHCENT6_R (FlyEM-HB:5813068669)"
                           ],
                           "sl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "label":"LHCENT6_R (FlyEM-HB:5813068669)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              19
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk5pt",
                           "curie":"VFB:jrchk5pt",
                           "short_form":"VFB_jrchk5pt",
                           "label_rdfs":[
                              "SLP234_R (FlyEM-HB:424379864)"
                           ],
                           "sl":"SLP234_R_4FlyEM4HB54243798644",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"SLP234_R_4FlyEM4HB54243798644",
                           "label":"SLP234_R (FlyEM-HB:424379864)"
                        }
                     ],
                     [
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjz4w",
                           "curie":"VFB:jrchjz4w",
                           "short_form":"VFB_jrchjz4w",
                           "label_rdfs":[
                              "LHCENT6_R (FlyEM-HB:5813068669)"
                           ],
                           "sl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "label":"LHCENT6_R (FlyEM-HB:5813068669)"
                        },
                        {
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              50
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        },
                        {
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk5pt",
                           "curie":"VFB:jrchk5pt",
                           "short_form":"VFB_jrchk5pt",
                           "label_rdfs":[
                              "SLP234_R (FlyEM-HB:424379864)"
                           ],
                           "sl":"SLP234_R_4FlyEM4HB54243798644",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"SLP234_R_4FlyEM4HB54243798644",
                           "label":"SLP234_R (FlyEM-HB:424379864)"
                        }
                     ]
                  ],
                  [
                     6306182,
                     6172386,
                     6285132,
                     7195126,
                     6563748,
                     5858847,
                     7437480
                  ],
                  66328,
                  81990,
                  4,
                  [
                     "6306182:1",
                     "6172386:1",
                     "6285132:1",
                     "7195126:1",
                     "6563748:0",
                     "5858847:0",
                     "7437480:0",
                     "7195126:0"
                  ]
               ],
               "meta":[
                  null,
                  [
                     {
                        "id":66328,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":6306182,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":74194,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":74194,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":6172386,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":40349,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":40349,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":6285132,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":79952,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":79952,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":7195126,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":81990,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":66328,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":6563748,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":40236,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":40236,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":5858847,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":68758,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":68758,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":7437480,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":79952,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":66328,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":6306182,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":74194,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":66328,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":4469017,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":74194,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":74194,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":6172386,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":40349,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":74194,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":4887181,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":40349,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":40349,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":6285132,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":79952,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":40349,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":7366420,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":79952,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":79952,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":7195126,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":81990,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":66328,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":6563748,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":40236,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":66328,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":7503483,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":40236,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":40236,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":5858847,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":68758,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":40236,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":7756897,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":68758,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":68758,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":7437480,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":79952,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  [
                     {
                        "id":68758,
                        "type":"node",
                        "deleted":false
                     },
                     {
                        "id":6668040,
                        "type":"relationship",
                        "deleted":false
                     },
                     {
                        "id":79952,
                        "type":"node",
                        "deleted":false
                     }
                  ],
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null,
                  null
               ],
               "graph":{
                  "nodes":[
                     {
                        "id":"79952",
                        "labels":[
                           "Entity",
                           "Adult",
                           "Anatomy",
                           "Cell",
                           "Individual",
                           "NBLAST",
                           "Nervous_system",
                           "Neuron",
                           "has_image",
                           "has_neuron_connectivity",
                           "has_region_connectivity"
                        ],
                        "properties":{
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk5pt",
                           "curie":"VFB:jrchk5pt",
                           "short_form":"VFB_jrchk5pt",
                           "label_rdfs":[
                              "SLP234_R (FlyEM-HB:424379864)"
                           ],
                           "sl":"SLP234_R_4FlyEM4HB54243798644",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"SLP234_R_4FlyEM4HB54243798644",
                           "label":"SLP234_R (FlyEM-HB:424379864)"
                        }
                     },
                     {
                        "id":"74194",
                        "labels":[
                           "Entity",
                           "Adult",
                           "Anatomy",
                           "Cell",
                           "GABAergic",
                           "Individual",
                           "NBLAST",
                           "Nervous_system",
                           "Neuron",
                           "has_image",
                           "has_neuron_connectivity",
                           "has_region_connectivity"
                        ],
                        "properties":{
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjrhd",
                           "curie":"VFB:jrchjrhd",
                           "short_form":"VFB_jrchjrhd",
                           "label_rdfs":[
                              "APL_R (FlyEM-HB:425790257)"
                           ],
                           "sl":"APL_R_4FlyEM4HB54257902574",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"APL_R_4FlyEM4HB54257902574",
                           "label":"APL_R (FlyEM-HB:425790257)"
                        }
                     },
                     {
                        "id":"81990",
                        "labels":[
                           "Entity",
                           "Adult",
                           "Anatomy",
                           "Cell",
                           "Cholinergic",
                           "Individual",
                           "NBLAST",
                           "Nervous_system",
                           "Neuron",
                           "has_image",
                           "has_neuron_connectivity",
                           "has_region_connectivity"
                        ],
                        "properties":{
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk82q",
                           "curie":"VFB:jrchk82q",
                           "short_form":"VFB_jrchk82q",
                           "label_rdfs":[
                              "aSP-g1_R (FlyEM-HB:949534412)"
                           ],
                           "sl":"aSP4g1_R_4FlyEM4HB59495344124",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"aSP4g1_R_4FlyEM4HB59495344124",
                           "label":"aSP-g1_R (FlyEM-HB:949534412)"
                        }
                     },
                     {
                        "id":"68758",
                        "labels":[
                           "Entity",
                           "Adult",
                           "Anatomy",
                           "Cell",
                           "Individual",
                           "NBLAST",
                           "Nervous_system",
                           "Neuron",
                           "has_image",
                           "has_neuron_connectivity",
                           "has_region_connectivity"
                        ],
                        "properties":{
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjz4w",
                           "curie":"VFB:jrchjz4w",
                           "short_form":"VFB_jrchjz4w",
                           "label_rdfs":[
                              "LHCENT6_R (FlyEM-HB:5813068669)"
                           ],
                           "sl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"LHCENT6_R_4FlyEM4HB558130686694",
                           "label":"LHCENT6_R (FlyEM-HB:5813068669)"
                        }
                     },
                     {
                        "id":"66328",
                        "labels":[
                           "Entity",
                           "Adult",
                           "Anatomy",
                           "Cell",
                           "Cholinergic",
                           "Individual",
                           "NBLAST",
                           "Nervous_system",
                           "Neuron",
                           "has_image",
                           "has_neuron_connectivity",
                           "has_region_connectivity"
                        ],
                        "properties":{
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchjvri",
                           "curie":"VFB:jrchjvri",
                           "short_form":"VFB_jrchjvri",
                           "label_rdfs":[
                              "KCab-p_R (FlyEM-HB:1108545472)"
                           ],
                           "sl":"KCab4p_R_4FlyEM4HB511085454724",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "qsl":"KCab4p_R_4FlyEM4HB511085454724",
                           "label":"KCab-p_R (FlyEM-HB:1108545472)"
                        }
                     },
                     {
                        "id":"40236",
                        "labels":[
                           "Entity",
                           "Adult",
                           "Anatomy",
                           "Cell",
                           "Glutamatergic",
                           "Individual",
                           "NBLAST",
                           "Nervous_system",
                           "Neuron",
                           "has_image",
                           "has_neuron_connectivity",
                           "has_region_connectivity"
                        ],
                        "properties":{
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0ed",
                           "curie":"VFB:jrchk0ed",
                           "short_form":"VFB_jrchk0ed",
                           "label_rdfs":[
                              "MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)"
                           ],
                           "sl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344",
                           "comment":[
                              "tracing status-Roughly traced, cropped-False"
                           ],
                           "label":"MBON06(B1>a)(AVM07)_L (FlyEM-HB:422725634)",
                           "qsl":"MBON064B16a44AVM074_L_4FlyEM4HB54227256344"
                        }
                     },
                     {
                        "id":"40349",
                        "labels":[
                           "Entity",
                           "Adult",
                           "Anatomy",
                           "Cell",
                           "Individual",
                           "NBLAST",
                           "Nervous_system",
                           "Neuron",
                           "has_image",
                           "has_neuron_connectivity",
                           "has_region_connectivity"
                        ],
                        "properties":{
                           "iri":"http://virtualflybrain.org/reports/VFB_jrchk0f8",
                           "curie":"VFB:jrchk0f8",
                           "short_form":"VFB_jrchk0f8",
                           "label_rdfs":[
                              "MBON20(y1y2)_R (FlyEM-HB:792368888)"
                           ],
                           "sl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "comment":[
                              "tracing status-Traced, cropped-False"
                           ],
                           "qsl":"MBON204y1y24_R_4FlyEM4HB57923688884",
                           "label":"MBON20(y1y2)_R (FlyEM-HB:792368888)"
                        }
                     }
                  ],
                  "relationships":[
                     {
                        "id":"6563748",
                        "type":"synapsed_to",
                        "startNode":"66328",
                        "endNode":"40236",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              33
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"7366420",
                        "type":"synapsed_to",
                        "startNode":"79952",
                        "endNode":"40349",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              10
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"6306182",
                        "type":"synapsed_to",
                        "startNode":"66328",
                        "endNode":"74194",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              64
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"5858847",
                        "type":"synapsed_to",
                        "startNode":"40236",
                        "endNode":"68758",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              71
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"4887181",
                        "type":"synapsed_to",
                        "startNode":"40349",
                        "endNode":"74194",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              35
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"7503483",
                        "type":"synapsed_to",
                        "startNode":"40236",
                        "endNode":"66328",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              4
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"6668040",
                        "type":"synapsed_to",
                        "startNode":"79952",
                        "endNode":"68758",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              50
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"6285132",
                        "type":"synapsed_to",
                        "startNode":"40349",
                        "endNode":"79952",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              34
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"7756897",
                        "type":"synapsed_to",
                        "startNode":"68758",
                        "endNode":"40236",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              1
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"7437480",
                        "type":"synapsed_to",
                        "startNode":"68758",
                        "endNode":"79952",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              19
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"7195126",
                        "type":"synapsed_to",
                        "startNode":"79952",
                        "endNode":"81990",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              12
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"6172386",
                        "type":"synapsed_to",
                        "startNode":"74194",
                        "endNode":"40349",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              20
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     },
                     {
                        "id":"4469017",
                        "type":"synapsed_to",
                        "startNode":"74194",
                        "endNode":"66328",
                        "properties":{
                           "iri":"http://purl.obolibrary.org/obo/RO_0002120",
                           "short_form":"RO_0002120",
                           "weight":[
                              35
                           ],
                           "label":"synapsed to",
                           "type":"Related"
                        }
                     }
                  ]
               }
            }
         ]
      }
   ],
   "errors":[
      
   ]
}

@admclachlan
Copy link
Contributor

admclachlan commented Sep 6, 2021

UI issues:

  • Lets you select neurons from different templates/projects
  • Hover over unreliable for me, seems to stop working after click + drag
  • Overplotting on arrows can occur? Potentially makes connectivity confusing and weights impossible to see.

@Robbie1977
Copy link
Contributor Author

What appears to be a loop is just overlapping edges
image

image

WITH "VFB_jrchjvri" as a, "VFB_jrchk2rm" AS b
MATCH (source:Neuron:has_neuron_connectivity {short_form: a}), (target:Neuron:has_neuron_connectivity {short_form: b})
CALL gds.beta.shortestPath.yens.stream({
nodeQuery: 'MATCH (n:Neuron:has_neuron_connectivity) RETURN id(n) AS id',
relationshipQuery: 'MATCH (a:Neuron:has_neuron_connectivity)-[r:synapsed_to]->(b:Neuron:has_neuron_connectivity) WHERE exists(r.weight) AND r.weight[0] >= 10 RETURN id(a) AS source, id(b) AS target, type(r) as type, 5000-r.weight[0] as weight_p',
sourceNode: id(source),
targetNode: id(target),
k: 2,  
relationshipWeightProperty: 'weight_p',  relationshipTypes: ['*'],  path: true}) YIELD index, sourceNode, targetNode, nodeIds, path WITH * ORDER BY index DESC 
UNWIND relationships(path) as sr OPTIONAL MATCH cp=(x:Neuron:has_neuron_connectivity)-[:synapsed_to]-(y:Neuron:has_neuron_connectivity) WHERE x=apoc.rel.startNode(sr) AND y=apoc.rel.endNode(sr) OPTIONAL MATCH fp=(x)-[r:synapsed_to]->(y) WHERE r.weight[0] >= 10 RETURN distinct a as root, collect(distinct fp) as pp, collect(distinct cp) as p, collect(distinct id(r)) as fr, sourceNode as source, targetNode as target, max(length(path)) as maxHops, collect(distinct toString(id(r))+':'+toString(index)) as relationshipY

@ddelpiano ddelpiano added the bug label Sep 14, 2021
jrmartin added a commit that referenced this issue Sep 15, 2021
autocomplete results for circuit browser
jrmartin added a commit that referenced this issue Sep 16, 2021
@jrmartin jrmartin linked a pull request Sep 16, 2021 that will close this issue
@Robbie1977
Copy link
Contributor Author

Main issue tested
image

@Robbie1977
Copy link
Contributor Author

overlapping also resolved
image

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

Successfully merging a pull request may close this issue.

4 participants