WorldHealthOrganization · costateixeira · Oct 17, 2023 · Oct 16, 2023 · Oct 16, 2023 · Oct 16, 2023
diff --git a/input/fsh/codesystems/ICD11.fsh b/input/fsh/codesystems/ICD11.fsh
@@ -0,0 +1,41 @@
+CodeSystem: ICD11
+Id: ICD11        
+Title:     "ICD-11"
+Description: "ICD-11."
+
+* ^url = $ICD11
+
+* #XM28X5 "Measles vaccines"
+  * #XM8L15 "Measles, live attenuated"
+  * #XM9439 "Measles, combinations with mumps, live attenuated"
+  * #XM8TF3 "Measles, combinations with mumps and rubella, live attenuated"
+  * #XM21H2 "Measles, combinations with rubella, live attenuated"
+  * #XM4AJ8 "Measles, combinations with mumps, rubella and varicella, live attenuated"
+
+* #XM1131 "Mumps vaccines"
+  * #XM2340 "Mumps, live attenuated"
+
+* #XX45B7 "Intersex"
+* #XX2PX3 "Biological sex not specified"
+* #XX2V25 "Female"
+* #XX2UQ8 "Male"
+* #1B1Z "Tuberculosis"
+* #1C62.Z "Human immunodeficiency virus disease without mention of tuberculosis or malaria"
+* #1H0Z "Certain infectious or parasitic diseases"
+* #3A51 "Sickle cell disorders or other haemoglobinopathies"
+* #4B4Z "Diseases of the immune system"
+* #KA21.4 "Preterm newborn"
+* #QA02.0 "Observation for suspected tuberculosis, ruled out"
+* #QA02.Y "Medical observation or evaluation for suspected diseases or conditions, ruled out"
+* #QA48.1 "Care or examination of lactating mother"
+* #QC60 "Family history of infectious diseases"
+* #XM18Y8 "Meningococcus C, purified polysaccharides antigen conjugated vaccines"
+* #XM2280 "Meningococcus A, purified polysaccharides antigen conjugated vaccines"
+* #XM33K4 "Typhoid, oral, live attenuated vaccines"
+* #XM3KQ4 "Interferon gamma"
+* #XM3SF6 "Typhoid, purified polysaccharide antigen vaccines"
+* #XM47S0 "Encephalitis, Japanese, live attenuated"
+* #XM5V19 "Poliomyelitis, trivalent, inactivated, whole virus"
+* #XM79H3 "Poliomyelitis oral, bivalent, live attenuated"
+* #XM7PF6 "Tuberculin"
+* #XT0S "Pregnancy"
diff --git a/input/fsh/codesystems/VaccineProducts.fsh b/input/fsh/codesystems/VaccineProducts.fsh
@@ -0,0 +1,14 @@
+CodeSystem: VaccineProducts
+Title:     "Vaccine Product codes CodeSet"
+Description: "Vaccine Product codes, containing the different available products."
+
+* ^property[+].code = #classification
+* ^property[=].type = #code
+* ^property[=].uri = "http://smart.who.int/ig/smart-immunizations-measles#classification"
+
+* #20009060/2 "Serum Institute of India Measles vaccine"
+  * ^property[+].code = #classification
+  * ^property[=].valueCode = #XM8L15
+* #7680007030014 "M-M-RvaxPRO"
+  * ^property[+].code = #classification
+  * ^property[=].valueCode = #XM8TF3
diff --git a/input/fsh/conceptmaps/IMMZ.D4.ConceptMap.fsh b/input/fsh/conceptmaps/IMMZ.D4.ConceptMap.fsh
@@ -0,0 +1,63 @@
+Instance:     IMMZ.D4.ConceptMap
+InstanceOf:   ConceptMap
+Description:  "Mapping to and from IMMZ.D4 Data Dictionary to other codesystems."
+Usage:        #definition
+
+* name = "IMMZ_D4_ConceptMap"
+* title = "ConceptMap to and from IMMZ.D4 DataElements"
+* status = #active
+* experimental = false
+* date = "2023-10-09"
+
+* group[+]
+  * source = Canonical(IMMZ.D4)
+  * target = $ICD11
+  * insert ElementMap(DE162, QA41, equivalent)
+  * insert ElementMap(DE165, 4B4Z, relatedto)
+  * insert ElementMap(DE166, QC44.0, equivalent)
+  * insert ElementMap(DE167, QC44.2, relatedto)
+  * insert ElementMap(DE168, 1C62.1, equivalent)
+
+* group[+]
+  * source = $ICD11
+  * target = Canonical(IMMZ.D4)
+  * insert ElementMap(QA41, DE162, equivalent)
+  * insert ElementMap(4B4Z, DE165, relatedto)
+  * insert ElementMap(QC44.0, DE166, equivalent)
+  * insert ElementMap(QC44.2, DE167, relatedto)
+  * insert ElementMap(1C62.1, DE168, equivalent)
+
+* group[+]
+  * source = Canonical(IMMZ.D4)
+  * target = $LNC
+  * insert ElementMap(DE162, 82810-3, equivalent)
+  * insert ElementMap(DE165, 96381-9, relatedto)
+  * insert ElementMap(DE168, 47244-9, wider)
+
+* group[+]
+  * source = $LNC
+  * target = Canonical(IMMZ.D4)
+  * insert ElementMap(82810-3, DE162, equivalent)
+  * insert ElementMap(96381-9, DE165, relatedto)
+  * insert ElementMap(47244-9, DE168, narrower)
+    * element[=].target[=].comment = "The source concept is more specific than the target"
+
+* group[+]
+  * source = Canonical(IMMZ.D4)
+  * target = $SCT
+  * insert ElementMap(DE162, 77386006, equivalent)
+  * insert ElementMap(DE165, 370388006, equivalent)
+  * insert ElementMap(DE166, 10839421000119100, equivalent)
+  * insert ElementMap(DE167, 419076005, wider)
+  * insert ElementMap(DE168, 86406008, equivalent)
+
+
+* group[+]
+  * source = $SCT
+  * target = Canonical(IMMZ.D4)
+  * insert ElementMap(77386006, DE162, equivalent)
+  * insert ElementMap(370388006, DE165, equivalent)
+  * insert ElementMap(10839421000119100, DE166, equivalent)
+  * insert ElementMap(419076005, DE167, narrower)
+    * element[=].target[=].comment = "The source concept is more specific than the target"
+  * insert ElementMap(86406008, DE168, equivalent)
diff --git a/input/fsh/examples/Immunization1.fsh b/input/fsh/examples/Immunization1.fsh
@@ -0,0 +1,11 @@
+Instance: Immunization1
+InstanceOf: SGImmunization
+Description: "Immunization record"
+* vaccineCode = $ICD11#XM28X5
+* lotNumber = "lot123"
+* expirationDate = "2023-10-01"
+//* extension[administeredProduct].valueReference = Reference(Measlesprod1)
+* extension[administeredProduct].valueCodeableConcept = VaccineProducts#20009060/2
+* patient.reference = "Patient/Patient1"
+* status = #completed
+* occurrenceDateTime = "2023-08-05"
diff --git a/input/fsh/examples/Vaccine-MSDMMRVaxPro.fsh b/input/fsh/examples/Vaccine-MSDMMRVaxPro.fsh
@@ -0,0 +1,7 @@
+Instance: Vaccine-MSDMMRVaxPro
+InstanceOf: SGVaccineProduct
+Title: "MSD - M-M-RvaxPRO"
+Description: "M-M-RvaxPRO"
+* code = VaccineProducts#7680007030014
+* extension[classification][+].valueCodeableConcept = $ICD11#XM8L15
+* extension[classification][+].valueCodeableConcept = $ICD11#XM2340
diff --git a/input/fsh/examples/Vaccine-SIIMeasles.fsh b/input/fsh/examples/Vaccine-SIIMeasles.fsh
@@ -0,0 +1,6 @@
+Instance: Vaccine-SIIMeasles
+InstanceOf: SGVaccineProduct
+Title: "Serum Institute of India Measles - Medication Product"
+Description: "Serum Institute of India Measles - Medication Product"
+* code = VaccineProducts#20009060/2
+* extension[classification][+].valueCodeableConcept = $ICD11#XM8L15
diff --git a/input/fsh/examples/VaccineProposal1.fsh b/input/fsh/examples/VaccineProposal1.fsh
@@ -0,0 +1,5 @@
+Instance: VaccineProposal1
+InstanceOf: SGVaccineProposal
+* status = #active
+* medicationCodeableConcept = $ICD11#XM28X5
+* subject = Reference(Patient/patient1)
diff --git a/input/fsh/extensions/SGIMMAdministeredProduct.fsh b/input/fsh/extensions/SGIMMAdministeredProduct.fsh
@@ -0,0 +1,5 @@
+Extension: SGIMMAdministeredProduct
+Id: sg-ext-administeredProduct
+Title: "SGAdministeredProduct"
+Description: "The product administered"
+* value[x] only Reference(SGVaccineProduct) or CodeableConcept
diff --git a/input/fsh/extensions/SGMedicationClassification.fsh b/input/fsh/extensions/SGMedicationClassification.fsh
@@ -0,0 +1,4 @@
+Extension: SGMedicationClassification
+Description: "Medication Classification."
+* value[x] only CodeableConcept
+* value[x] from VaccineTypes (required)
diff --git a/input/fsh/models/codes-IMMZ.D4.fsh b/input/fsh/models/codes-IMMZ.D4.fsh
@@ -28,66 +28,3 @@ Description:  "ValueSet for Potential Contraindications for IMMZ.D4.DE161."
 * IMMZ.D4#DE168 "Symptomatic HIV infection"
 
 
-Instance:     IMMZ.D4.ConceptMap
-InstanceOf:   ConceptMap
-Description:  "Mapping to and from IMMZ.D4 Data Dictionary to other codesystems."
-Usage:        #definition
-
-* name = "IMMZ_D4_ConceptMap"
-* title = "ConceptMap to and from IMMZ.D4 DataElements"
-* status = #active
-* experimental = false
-* date = "2023-10-09"
-
-* group[+]
-  * source = Canonical(IMMZ.D4)
-  * target = $ICD11
-  * insert ElementMap(DE162, QA41, equivalent)
-  * insert ElementMap(DE165, 4B4Z, relatedto)
-  * insert ElementMap(DE166, QC44.0, equivalent)
-  * insert ElementMap(DE167, QC44.2, relatedto)
-  * insert ElementMap(DE168, 1C62.1, equivalent)
-
-* group[+]
-  * source = $ICD11
-  * target = Canonical(IMMZ.D4)
-  * insert ElementMap(QA41, DE162, equivalent)
-  * insert ElementMap(4B4Z, DE165, relatedto)
-  * insert ElementMap(QC44.0, DE166, equivalent)
-  * insert ElementMap(QC44.2, DE167, relatedto)
-  * insert ElementMap(1C62.1, DE168, equivalent)
-
-* group[+]
-  * source = Canonical(IMMZ.D4)
-  * target = $LNC
-  * insert ElementMap(DE162, 82810-3, equivalent)
-  * insert ElementMap(DE165, 96381-9, relatedto)
-  * insert ElementMap(DE168, 47244-9, wider)
-
-* group[+]
-  * source = $LNC
-  * target = Canonical(IMMZ.D4)
-  * insert ElementMap(82810-3, DE162, equivalent)
-  * insert ElementMap(96381-9, DE165, relatedto)
-  * insert ElementMap(47244-9, DE168, narrower)
-  * element[=].target[=].comment = "The source concept is more specific than the target"
-
-* group[+]
-  * source = Canonical(IMMZ.D4)
-  * target = $SCT
-  * insert ElementMap(DE162, 77386006, equivalent)
-  * insert ElementMap(DE165, 370388006, equivalent)
-  * insert ElementMap(DE166, 10839421000119100, equivalent)
-  * insert ElementMap(DE167, 419076005, wider)
-  * insert ElementMap(DE168, 86406008, equivalent)
-
-
-* group[+]
-  * source = $SCT
-  * target = Canonical(IMMZ.D4)
-  * insert ElementMap(77386006, DE162, equivalent)
-  * insert ElementMap(370388006, DE165, equivalent)
-  * insert ElementMap(10839421000119100, DE166, equivalent)
-  * insert ElementMap(419076005, DE167, narrower)
-  * element[=].target[=].comment = "The source concept is more specific than the target"
-  * insert ElementMap(86406008, DE168, equivalent)
diff --git a/input/fsh/profiles/SGImmunization.fsh b/input/fsh/profiles/SGImmunization.fsh
@@ -0,0 +1,5 @@
+Profile: SGImmunization
+Parent: Immunization
+Description: "A record of an immunization, with a given product"
+
+* extension contains SGIMMAdministeredProduct named administeredProduct 0..1
diff --git a/input/fsh/profiles/SGVaccineProduct.fsh b/input/fsh/profiles/SGVaccineProduct.fsh
@@ -0,0 +1,5 @@
+Profile: SGVaccineProduct
+Parent: Medication
+Description: "A Vaccine product"
+
+* extension contains SGMedicationClassification named classification 0..* MS
diff --git a/input/fsh/profiles/SGVaccineProposal.fsh b/input/fsh/profiles/SGVaccineProposal.fsh
@@ -0,0 +1,5 @@
+Profile: SGVaccineProposal
+Parent: MedicationRequest
+Description: "An order for immunization (for a disease, not a specific product)"
+* intent = #proposal
+* medicationCodeableConcept from VaccineTypes
diff --git a/input/fsh/profiles/SGVaccineRequest.fsh b/input/fsh/profiles/SGVaccineRequest.fsh
@@ -0,0 +1,5 @@
+Profile: SGVaccineRequest
+Parent: MedicationRequest
+Description: "An order for an actual product"
+* intent = #instance-order
+* medication[x] only Reference(SGVaccineProduct) 
diff --git a/input/fsh/scenarios/scenario1.fsh → input/fsh/scenarios/scenario1.fshNO b/input/fsh/scenarios/scenario1.fsh → input/fsh/scenarios/scenario1.fshNO
diff --git a/input/fsh/valuesets/MeaslesVaccineProducts.fsh b/input/fsh/valuesets/MeaslesVaccineProducts.fsh
@@ -0,0 +1,5 @@
+ValueSet: VSMeaslesVaccineProducts
+Id: VSMeaslesVaccineProducts        
+Title:     "MeaslesVaccine Type ValueSet"
+Description: "Vaccine type Codes, containing the different types of antigens used in vaccine guidelines."
+* codes from system VaccineProducts //where classification = "XM28X5"
diff --git a/input/fsh/valuesets/VaccineTypes.fsh b/input/fsh/valuesets/VaccineTypes.fsh
@@ -0,0 +1,5 @@
+ValueSet: VaccineTypes
+Id: VaccineTypes        
+Title:     "Vaccine Type ValueSet"
+Description: "Vaccine type Codes, containing the different types of antigens used in vaccine guidelines."
+* codes from system ICD11
diff --git a/input/resources/device/cqf-tooling.json b/input/resources/device/cqf-tooling.json
@@ -0,0 +1 @@
+{"resourceType":"Device","id":"cqf-tooling","meta":{"profile":["http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/device-softwaresystem-cqfm"]},"manufacturer":"CQFramework","deviceName":[{"name":"cqf-tooling","type":"manufacturer-name"}],"type":{"coding":[{"system":"http://hl7.org/fhir/us/cqfmeasures/CodeSystem/software-system-type","code":"tooling"}]},"version":[{"value":"2.4.0"}]}
Original file line number	Diff line number	Diff line change
		@@ -0,0 +1 @@
		{"resourceType":"Device","id":"cqf-tooling","meta":{"profile":["http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/device-softwaresystem-cqfm"]},"manufacturer":"CQFramework","deviceName":[{"name":"cqf-tooling","type":"manufacturer-name"}],"type":{"coding":[{"system":"http://hl7.org/fhir/us/cqfmeasures/CodeSystem/software-system-type","code":"tooling"}]},"version":[{"value":"2.4.0"}]}