GitHub - abakirbas/B_caapi_transcriptomics: Transcriptomics analyses for B. caapi project

Scripts and outputs for Banisteriopsis caapi genome project

Including de novo genome annotation and QC stats for B. caapi

Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
.DS_Store		.DS_Store
.gitattributes		.gitattributes
.gitignore		.gitignore
Bcaapi_hisat2.sh		Bcaapi_hisat2.sh
Bcaapi_stringtie_mamba.sh		Bcaapi_stringtie_mamba.sh
Bcaapi_transdecoder.sh		Bcaapi_transdecoder.sh
LICENSE		LICENSE
README.md		README.md
bcaapi_merged_transcripts.fa.transdecoder.pep.length_histogram.png		bcaapi_merged_transcripts.fa.transdecoder.pep.length_histogram.png
bcaapi_merged_transcripts.fa.transdecoder.pep.lengths.txt		bcaapi_merged_transcripts.fa.transdecoder.pep.lengths.txt
protein_length_distribution_analysis.R		protein_length_distribution_analysis.R
run_QCstats.sh		run_QCstats.sh
submit_rnaseq_analysis.sh		submit_rnaseq_analysis.sh
tdecoder_merge_ncRNApreds.sh		tdecoder_merge_ncRNApreds.sh