Adopts nexb/skeleton

.gitattributes

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+# Set configure.bat's line ending to CRLF. Sometimes batch scripts don't work
+# properly on Windows if the line ending is LF and not CRLF
+configure.bat eol=crlf

.gitignore

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-.idea/
+# Python compiled files
+*.py[cod]
+
+# virtualenv and other misc bits
+*.egg-info
+/dist
+/build
+/bin
+/lib
+/scripts
+/Scripts
+/Lib
+/pip-selfcheck.json
+/tmp
+.Python
+/include
+/Include
+/local
+*/local/*
+/local/
+/share/
+/tcl/
+/.eggs/
+
+# Installer logs
+pip-log.txt
+
+# Unit test / coverage reports
+.cache
+.coverage
+.coverage.*
+nosetests.xml
+htmlcov
+
+# Translations
+*.mo
+
+# IDEs
+.project
+.pydevproject
+.idea
+org.eclipse.core.resources.prefs
+.vscode
+.vs
+
+# Sphinx
+docs/_build
+docs/bin
+docs/build
+docs/include
+docs/Lib
+doc/pyvenv.cfg
+pyvenv.cfg
+
+# Various junk and temp files
+.DS_Store
+*~
+.*.sw[po]
+.build
+.ve
+*.bak
+/.cache/
+
+# pyenv
+/.python-version
+/man/
+/.pytest_cache/
+lib64
+tcl
+
+# Ignore Jupyter Notebook related temp files
 .ipynb_checkpoints/
-**hdf5/
-**.h5
-src/notebooks/junk*
-src/results_analyze/__init__.py
-src/results_analyze/__pycache__/
-src/notebooks/dask-worker-space/
-src/results_analyze/data/credentials.json

.travis.yml

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+# This is a skeleton Travis CI config file that provides a starting point for adding CI
+# to a Python project. Since we primarily develop in python3, this skeleton config file
+# will be specific to that language.
+#
+# See https://config.travis-ci.com/ for a full list of configuration options.
+
+os: linux
+
+dist: xenial
+
+language: python
+python:
+  - "3.6"
+  - "3.7"
+  - "3.8"
+
+# Scripts to run at install stage
+install: ./configure
+
+# Scripts to run at script stage
+script: tmp/bin/pytest

AUTHORS.rst

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+The following organizations or individuals have contributed to this repo:
+
+- 

CHANGELOG.rst

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+Release notes
+-------------
+### Version 0.0.0
+
+*xxxx-xx-xx* -- Initial release.

README.rst

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+A Simple Python Project Skeleton
+================================
+This repo attempts to standardize our python repositories using modern python
+packaging and configuration techniques. Using this `blog post`_ as inspiration, this
+repository will serve as the base for all new python projects and will be adopted to all 
+our existing ones as well.
+
+.. _blog post: https://blog.jaraco.com/a-project-skeleton-for-python-projects/
+
+Usage
+=====
+A brand new project
+-------------------
+.. code-block:: bash
+
+    git init my-new-repo
+    cd my-new-repo
+    git pull [email protected]:nexB/skeleton
+
+From here, you can make the appropriate changes to the files for your specific project.
+
+Update an existing project
+---------------------------
+.. code-block:: bash
+
+    cd my-existing-project
+    git remote add skeleton [email protected]:nexB/skeleton
+    git fetch skeleton
+    git merge skeleton/main --allow-unrelated-histories
+
+This is also the workflow to use when updating the skeleton files in any given repository.

apache-2.0.LICENSE

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+                                 Apache License
+                           Version 2.0, January 2004
+                        http://www.apache.org/licenses/
+
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azure-pipelines.yml

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+
+################################################################################
+# We use Azure to run the full tests suites on Python 3.6
+# on Windows (32 and 64), macOS and Linux (64 various distro)
+################################################################################
+
+jobs:
+
+################################################################################
+# These jobs are using VMs and Azure-provided Python 3.6
+################################################################################
+
+    - template: etc/ci/azure-linux.yml
+      parameters:
+          job_name: ubuntu18_py36
+          image_name: ubuntu-18.04
+          python_versions: ['3.6']
+          test_suites:
+              all: tmp/bin/pytest -n 2 -vvs
+
+    - template: etc/ci/azure-mac.yml
+      parameters:
+          job_name: macos1015_py36
+          image_name: macos-10.15
+          python_versions: ['3.6']
+          test_suites:
+              all: tmp/bin/pytest -n 2 -vvs
+
+    - template: etc/ci/azure-win.yml
+      parameters:
+          job_name: win2019_32_py36
+          image_name: windows-2019
+          python_versions: ['3.6']
+          python_architecture: x86
+          test_suites:
+              all: tmp\Scripts\pytest -vvs
+
+    - template: etc/ci/azure-win.yml
+      parameters:
+          job_name: win2019_64_py36
+          image_name: windows-2019
+          python_versions: ['3.6']
+          python_architecture: x64
+          test_suites:
+              all: tmp\Scripts\pytest -vvs