templateCreator is a set of shell scripts pipelines designed to create DTI (Diffusion Tensor Imaging) templates. This repository contains all the necessary scripts and instructions to generate high-quality DTI templates.
The templateCreator repository provides a comprehensive solution for creating DTI templates using shell scripts. These templates are essential for various neuroimaging analyses and research.
- Automated pipeline for creating DTI templates
- Easy to configure and run
- Generates high-quality templates suitable for neuroimaging research
- Unix-based operating system (Linux, macOS)
- Bash shell
- Required software: FSL
- Clone the repository:
git clone https://github.com/acsenrafilho/templateCreator.git
- Navigate to the cloned directory:
cd templateCreator - Ensure all required software and dependencies are installed (anyway, if there is an dependency missing, the script will notify you for further instructions).
-
Configure the scripts according to your requirements:
- Edit the configuration files (if any) to specify input data and parameters. This is based on small adjustments in the header section of the running script.
-
Run the main script to start the pipeline:
./build_template
- Replace
build_templatewith the actual entry point script name.
- Replace
-
Follow the instructions provided by the scripts.
Contributions are welcome! If you have improvements or fixes, please follow these steps:
- Fork the repository.
- Create a new branch (
git checkout -b feature-branch). - Make your changes.
- Commit your changes (
git commit -m 'Add some feature'). - Push to the branch (
git push origin feature-branch). - Open a Pull Request.
This project is licensed under the GNU General Public License v3.0 - see the LICENSE file for details.
If you have any questions or need further assistance, please contact the repository owner:
- GitHub: acsenrafilho