Remove existing tests that are duplicated by PUBLISH_GENOME tests #15
adamrtalbotAnnotations
325 errors and 1 warning
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default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
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gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
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skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
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skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
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gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
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gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
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gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
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transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
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with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
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rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
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salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
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hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
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gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
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featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
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skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
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skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
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|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
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gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
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skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
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skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
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gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
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gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
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gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
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transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
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with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
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rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
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salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
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hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
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gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
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featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
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skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
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skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
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|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
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gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
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skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
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skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
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gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
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gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
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gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
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transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
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with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
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rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
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salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
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hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
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gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
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featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
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skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
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skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
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|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
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gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
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skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
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skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
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gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
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gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
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gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
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transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
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with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
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rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
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salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
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hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
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gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
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featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
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skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
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skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
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default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
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gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
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skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
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gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
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gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
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gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
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transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
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with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
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rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
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salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
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gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
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featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
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skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
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skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
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skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
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gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
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gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
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gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
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|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
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with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
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salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
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skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
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skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
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skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
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skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
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gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
Run with profile test:
Run with profile test#L1
Assertion failed:
1 of 1 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
default options:
default options#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = false:
gencode = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter:
skip_gtf_filter#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment:
skip_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_psuedo_alignment:
skip_psuedo_alignment#L1
Assertion failed:
1 of 2 assertions failed
|
|
gtf = false:
gtf = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gff = false:
gff = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gfp = false:
gfp = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
transcriptome = false:
transcriptome = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
with bed:
with bed#L1
Assertion failed:
1 of 2 assertions failed
|
|
rsem_index = false:
rsem_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
salmon_index = false:
salmon_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
hisat2_index = false:
hisat2_index = false#L1
Assertion failed:
1 of 2 assertions failed
|
|
gencode = true:
gencode = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
featurecounts_group_type = 'gene_type':
featurecounts_group_type = 'gene_type'#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_gtf_filter = true:
skip_gtf_filter = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_alignment = true:
skip_alignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
skip_pseudoalignment = true:
skip_pseudoalignment = true#L1
Assertion failed:
1 of 2 assertions failed
|
|
nf-core
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
|
Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
|
linting-logs
Expired
|
13 KB |
|