Releases: answerdigital/oxford-omop-data-mapper
Releases · answerdigital/oxford-omop-data-mapper
1.0.0
Oxford Omop Data Mapper v1.0.0 Release Notes
Current Aims
The current scope for the transformation at source data level is as follows:
Source Data Set | Version(s) Supported |
---|---|
CDS - Commissioning Data Sets | EMIS Infoflex 6.2 fixed width multiline text format |
COSD - Cancer Outcomes and Services Dataset | v8-1 and v9-0-1 xml formats |
SACT - Systemic Anti-Cancer Therapy Data Set | v3.0 |
RTDS - Radiotherapy Data Set | Varian ARIA Oncology Information System format |
The current scope for the transformation at table and field level has been selected based on the HDR UK minimum field set for cohorting queries. In addition to this, any other mandatory OMOP fields for the respective tables have been considered. Some additional tables and fields have been included as these were picked up as part of the analysis process. To see which fields and tables have been considered, please see the transformation documentation section of the site.
Supported Transformations
OMOP Table | CDS | COSD | RTDS | SACT |
---|---|---|---|---|
Location | ✔ | ✔ | ✔ | ✔ |
Person | ✔️ | ✔️ | ✔️ | ✔️ |
Condition Occurrence | ✔️ | ✔️ | ||
Visit Occurrence | ✔️ | |||
Visit Details | ✔️ | |||
Measurement | ✔️ ❗ | ✔️ | ||
Death | ✔️ | ✔ | ||
Procedure Occurrence | ✔️ | ✔️ | ||
Drug Exposure | ✔ | |||
Observation | ✔ | ✔️ |
Getting Started
To get started with Data Migration Tool v1.0.0, visit our official website for download instructions, comprehensive documentation, and more.