ClinicaDL 1.2.0

ClinicaDL 1.2.0

Changed

** Core: **

• Add ClinicaDL installation with pipx.
• Improve logging.
• Add method argument to the interpret command to choose between the new Grad-CAM method and the gradient method.
• Change extract command to prepare-data.
• Change output of get-labels, split and kfold commands to one TSV per split instead of one per label.
• Change tsvtool command to tsvtools.
• Change tsvtools getlabels command to tsvtools get-labels and remove the progression column in the TSV output.
• Add new commands: tsvtools get-progression, tsvtools get-metadata, tsvtools prepare-experiment (split + kfold), and tsvtools adapt.
• Update data CI.
• Add a new model for quality check

Fixed

• Fix quality-check t1-linear