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Update branch-0.19 from release#41

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aschaffer merged 185 commits intoaschaffer:branch-0.19aschaffer/cugraph:branch-0.19from rapidsai:branch-0.19rapidsai/cugraph:branch-0.19Copy head branch name to clipboardFeb 25, 2021

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Commits

Commits on Nov 5, 2020

• API declaration for copy_v_transform_reduce_key_aggregated_out_nbr and transform_reduce_by_key_e

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• add coarsening based graph constructor

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• Merge branch 'branch-0.17' of github.com:rapidsai/cugraph into fea_graph_prims

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• minor documentation fix

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Commits on Nov 6, 2020

• remove the coarsen function

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Commits on Nov 8, 2020

• several cleanups (graph.cu)

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Commits on Nov 10, 2020

• fixed typos in documentation

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• add graph_functions.cu

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Commits on Nov 11, 2020

• Merge branch 'branch-0.17' of github.com:rapidsai/cugraph into fea_graph_prims

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Commits on Nov 12, 2020

• add functions to compute mappings between vertex/edge and GPU rank

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• temporary commit of WIP graph coarsening functions for communication

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Commits on Nov 13, 2020

• update headers for graph coarsening and relabeling

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Commits on Nov 18, 2020

• cosmetic updates

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• temporary commit of WIP graph coarsening functions for communication

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Commits on Nov 19, 2020

• add const to (vertex,edge)_to_gpu_id functor operator

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• allocate_comm_buffer return type: thrust::make_tuple to std::make_tuple

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• fix compile errors

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• Merge branch 'branch-0.17' of github.com:rapidsai/cugraph into fea_graph_prims

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• Merge branch 'branch-0.17' of github.com:rapidsai/cugraph into fea_graph_prims

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• update graph_functions header

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• move shuffle_values to graph_utils.cuh for better reusability

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• add SG implementation

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Commits on Nov 20, 2020

• Merge branch 'branch-0.17' of github.com:rapidsai/cugraph into fea_graph_prims

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Commits on Nov 23, 2020

• fix a function API error

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• update shuffle_values

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• update graph functions

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• enable multigraph

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Commits on Nov 24, 2020

• recover accidentally deleted code

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• add functions to query number of edges per partition

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• Merge branch 'branch-0.17' of github.com:rapidsai/cugraph into fea_graph_prims

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Commits on Dec 1, 2020

• add tests and fixes

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Commits on Dec 2, 2020

• add graph from multigraph functionality

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• update test, add changelog

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• Merge branch 'branch-0.17' of github.com:rapidsai/cugraph into fea_graph_prims

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• style

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Commits on Dec 3, 2020

• Merge branch 'branch-0.17' of github.com:rapidsai/cugraph into fea_graph_prims

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• Merge remote-tracking branch 'upstream/branch-0.18' into fea_graph_prims

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• update shuffle_values to take raft::comms::comms_t & cudaStream_t instead of raft::handle_t

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• add get_local_offset() to matrix_partition_device_base_t

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• merge conflicts

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Commits on Dec 4, 2020

• update symmetrize

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• remove unnecessary stream sync

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Commits on Dec 8, 2020

• cosmetic update/adding comments

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Commits on Dec 9, 2020

• temp commit

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Commits on Dec 10, 2020

• add host_scalar_reduce()

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• add host_scalar_gather & host_scalar_gatherv

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• add device_gatherv

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Commits on Dec 11, 2020

• Merge branch 'branch-0.18' of github.com:rapidsai/cugraph into fea_graph_prims

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• fix compile error

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• remove return at the end in void functions

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• copy_v_transform_reduce_key_aggregated_out_nbr

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• remove return at the end of a void function

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Commits on Dec 15, 2020

• add resize_comm_buffer

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• initial implementation of transform_reduce_by_adj_matrix_row_col_key_e & copy_v_transform_reduce_key_aggregated_out_nbr

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Commits on Dec 16, 2020

• update documentation

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Commits on Dec 22, 2020

• split graph_functions.cu to coarsen_graph.cu, relabel.cu, and renumber_edgelist.cu

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• Merge branch 'branch-0.18' of github.com:rapidsai/cugraph into fea_graph_prims

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• split comm_utils.cuh to host_scalar_comm.cuh, device_comm.cuh, and dataframe_buffer.cuh

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Commits on Dec 23, 2020

• refactor shuffle_values

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Commits on Jan 5, 2021

• cosmetic updates

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• Merge branch 'branch-0.18' of github.com:rapidsai/cugraph into fea_graph_prims

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• add C++ coarsen_graph_test

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• update GIT tag for cuco

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Commits on Jan 6, 2021

• Merge branch 'branch-0.18' of github.com:rapidsai/cugraph into fea_graph_prims

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• debug coarsen_graph test

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Commits on Jan 7, 2021

• add coarsen_grpah functions taking both vertices and edge list

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• update renumber_edgelist to optionally take vertex list

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• add coarsen_graph test (C++ SG)

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• working dir

  

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• add initial API for induced subgraph

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Commits on Jan 9, 2021

• fix API inconsistencies in graph functions.hpp (compare to graph primitives based algorithms in algorithms.hpp)

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Commits on Jan 11, 2021

• improving error checking and docs

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• issues 1117 - replaced Invalid API with Invalid input

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• issues 1117

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• oversubscription

  

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• cleaned up imports

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• better docs

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• drop duplicate edge centrality entry

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• added more introp doc

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• style fix

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• clang fixes

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Commits on Jan 12, 2021

• add induced_subgraph.cu to CMakeLists.txt

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• induced subgraph error check

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• Merge branch 'branch-0.18' of github.com:rapidsai/cugraph into fea_graph_prims

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• clang-format

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• update copyright year

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• Merge branch 'branch-0.18' of github.com:rapidsai/cugraph into fea_induced_subgraph

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• tmp commit-induced subgraph implementation

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• temporarily disable raft comms gather & gatherv calls till the RAFT gather & gatherv PR is merged

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Commits on Jan 13, 2021

• cuco::static_map does not support Pascal, throw an exception and do not compile code using cuco_static_map on Pascal

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• disable coarsen_grpah testing on Pascal or older

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• Merge pull request #1257 from seunghwak/fea_graph_prims

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• updated intro

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• updated perf gain

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• updated copyright year

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Commits on Jan 14, 2021

• refac

  

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• expose dense version of hungarian algorithm

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• update bad error message

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• update documentation

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• fix flake8 issue

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• update copyright year

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Commits on Jan 15, 2021

• Merge remote-tracking branch 'upstream/branch-0.18' into branch-0.18-dataset_env_var

  

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• fixed style error

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• Set a specific known working commit hash for gunrock instead of "dev"(#1336)

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• slowly moving to better error messages

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• fixed typo

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• clang format

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• note that the dense API is unstable for now

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Commits on Jan 16, 2021

• Merge remote-tracking branch 'upstream/branch-0.18' into branch-0.18-dataset_env_var

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• env_fixed

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Commits on Jan 17, 2021

• Fix #1340 - Use generic from_edgelist() methods

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• Update updated date

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• Update updated date

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Commits on Jan 19, 2021

• Merge pull request #1327 from BradReesWork/branch-0.18-docs

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• Merge pull request #1341 from miguelusque/patch-1

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• Pin gunrock to v1.2 for version 0.18

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• address review comments

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• Updates to reflect RAFT PR #120 API changes

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• clean up some unused things

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Commits on Jan 20, 2021

• review changes

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• resolve conflict

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• Merge pull request #1333 from ChuckHastings/fea_dense_hungarian

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• refac_revision

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• Merge pull request #1342 from ChuckHastings/bug_set_gunrock_version

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• Update CODEOWNERS to add configuration for new cugraph-doc-codeowners group. Updated SOURCEBUILD.md to include most recent build.sh options.

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• Reverting changes to SOURCEBUILD.md so they can be applied later to test new CODEOWNERS after it's been merged.

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• Fixed typo in comment.

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• Update raft git tag

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• Update copyright year for style checking

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Commits on Jan 21, 2021

• resolve merge conflicts

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• Add doc

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• initial implementation of extract_induced_subgraph

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• Merge pull request #1344 from rlratzel/branch-0.18-codeowners

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• Merge pull request #1343 from drobison00/bug-nccl-fix

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• Merge pull request #1280 from Iroy30/add_multigraph

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• Merge pull request #1337 from jnke2016/branch-0.18-dataset_env_var

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• Merge pull request #1350 from rapidsai/branch-0.17

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• fixed C++ test naming mistakes

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• Updated SOURCEBUILD.md to include the latest build.sh options.

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• rename extract_induced_subgraph to extract_induced_subgraph"s"

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Commits on Jan 22, 2021

• Merge branch 'branch-0.18' of github.com:rapidsai/cugraph into fea_induced_subgraph

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• add induced sugraph test

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• bug fixes

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• add test cases for untrasposed graphs

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Commits on Jan 25, 2021

• remove unnecessary cudaStreamSynchronize calls

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• add comments to induced_subgraph.cu

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• add additional explicit instantiations

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Commits on Jan 26, 2021

• Merge pull request #1354 from seunghwak/fea_induced_subgraph

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• Merge pull request #1351 from rlratzel/branch-0.18-docupdate

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Commits on Jan 27, 2021

• DOC v0.19 Updates

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Commits on Feb 1, 2021

• Prepare Changelog for Automation (#1368)

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Commits on Feb 2, 2021

• SG Pagerank transition (#1332)

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• Auto-label PRs based on their content (#1358)

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• Enabling pytest code coverage output by default (#1352)

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• Bug fixes for MNMG coarsen_graph, renumber_edgelist, relabel (#1364)

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Commits on Feb 3, 2021

• Update the conda environments and README file (#1369)

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• Implement MNMG Renumber (#1355)

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Commits on Feb 4, 2021

• Update CMakeLists.txt files for consistency with RAPIDS and to support cugraph as an external project and other tech debt removal (#1367)

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• EgoNet (#1365)

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Commits on Feb 5, 2021

• update subgraph tests and remove legacy pagerank (#1378)

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• Build a Dendrogram class, adapt Louvain/Leiden/ECG to use it (#1359)

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• Merge branch-0.18 into branch-0.19

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Commits on Feb 8, 2021

• Merge pull request #1377 from ajschmidt8/branch-0.19-merge-0.18

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Commits on Feb 10, 2021

• Updated CI scripts to use a different error handling convention, updated LD_LIBRARY_PATH for project flash runs (#1386)

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  rlratzel

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• Merge pull request #1396 from rapidsai/branch-0.18

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  GPUtester

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• Use new coarsen_graph primitive in Louvain (#1362)

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• Merge pull request #1397 from rapidsai/branch-0.18

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• Added initial infrastructure for MG C++ testing and a Pagerank MG test using it (#1361)

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  rlratzel

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• Merge pull request #1402 from rapidsai/branch-0.18

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Commits on Feb 11, 2021

• Add SG TSP (#1360)

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• Merge pull request #1403 from rapidsai/branch-0.18

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Commits on Feb 16, 2021

• Add GHA to mark issues/prs as stale/rotten (#1408)

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• Merge pull request #1409 from rapidsai/branch-0.18

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Commits on Feb 17, 2021

• Update stale GHA with exemptions & new labels (#1413)

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• Merge pull request #1414 from rapidsai/branch-0.18

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• TSP fix route return (#1412)

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  hlinsen

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• Merge pull request #1416 from rapidsai/branch-0.18

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Commits on Feb 22, 2021

• Rename sort_and_shuffle to groupby_gpuid_and_shuffle (#1392)

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Commits on Feb 23, 2021

• ENH Build with cmake --build & Pass ccache variables to conda recipe & use Ninja in CI (#1415)

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