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@@ -7,50 +7,50 @@ on: | |
- dev | ||
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jobs: | ||
test: | ||
runs-on: ubuntu-latest | ||
R-CMD: | ||
runs-on: ${{ matrix.config.os }} | ||
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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strategy: | ||
fail-fast: false | ||
matrix: | ||
config: | ||
- { os: ubuntu-latest, r: 'devel', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"} | ||
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env: | ||
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | ||
GITHUB_PAT: ${{secrets.GH_GCAMREPORT_TOKEN}} | ||
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steps: | ||
- uses: actions/checkout@v2 | ||
- uses: actions/checkout@v1 | ||
- uses: r-lib/actions/setup-r@v2-branch | ||
with: | ||
r-version: '4.1.0' | ||
r-version: '3.6' | ||
- uses: r-lib/actions/setup-pandoc@v2-branch | ||
- uses: r-lib/actions/setup-tinytex@v2-branch | ||
- uses: actions/download-artifact@v2 | ||
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- name: Cache R packages | ||
uses: actions/cache@v1 | ||
with: | ||
path: ${{ env.R_LIBS_USER }} | ||
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | ||
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | ||
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- name: Ubuntu config | ||
- name: Install libraries | ||
if: startsWith(matrix.config.os, 'ubuntu') | ||
run: | | ||
sudo apt-add-repository ppa:ubuntugis/ubuntugis-unstable | ||
sudo apt-get update | ||
sudo apt-get install -y libcurl4-openssl-dev libharfbuzz-dev libfribidi-dev libssl-dev libxml2-dev libudunits2-dev libgdal-dev libgeos-dev libproj-dev libmagick++-dev libavfilter-dev | ||
sudo apt-get install -y libcurl4-openssl-dev libssl-dev libxml2-dev libudunits2-dev libgdal-dev libgeos-dev libproj-dev libmagick++-dev libavfilter-dev libharfbuzz-dev libfribidi-dev | ||
- name: Install dependencies | ||
run: | | ||
install.packages(c("remotes","rcmdcheck","covr"), repos = "https://cloud.r-project.org") | ||
remotes::install_github("JGCRI/rpackageutils") | ||
install.packages(c("remotes","rcmdcheck"), repos = "https://cloud.r-project.org") | ||
remotes::install_deps(dependencies = TRUE) | ||
remotes::install_github("JGCRI/rpackageutils") | ||
shell: Rscript {0} | ||
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# - name: Test coverage | ||
# run: | | ||
# cov <- covr::package_coverage() | ||
# covr:::report(cov, file = "coverage.xml") | ||
# shell: Rscript {0} | ||
- name: Test coverage | ||
run: | | ||
cov <- covr::package_coverage() | ||
covr:::report(cov, file = "coverage.xml") | ||
shell: Rscript {0} | ||
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- uses: codecov/[email protected] | ||
with: | ||
# token: ${{secrets.CODECOV_TOKEN}} | ||
token: ${{secrets.CODECOV_TOKEN}} | ||
files: ./coverage.xml | ||
verbose: true |