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Update ci.yml
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daichengxin committed Jul 22, 2024
1 parent 159d6e5 commit f2221b2
Showing 1 changed file with 2 additions and 3 deletions.
5 changes: 2 additions & 3 deletions .github/workflows/ci.yml
Original file line number Diff line number Diff line change
Expand Up @@ -68,10 +68,9 @@ jobs:
echo "$(pwd)/micromamba/bin" >> $GITHUB_PATH
./bin/micromamba shell init -s bash
echo $'channels:\n - conda-forge\n - bioconda\n - defaults\nuse_lockfiles: false' >> ~/.mambarc
- name: Install Singularity
- name: Install Singularity with defaults
if: matrix.exec_profile == 'singularity'
- name: Singularity install with defaults
uses: singularityhub/install-singularity@main
uses: singularityhub/install-singularity@main
- name: Run pipeline with test data in docker profile
if: matrix.exec_profile == 'docker'
# TODO nf-core: You can customise CI pipeline run tests as required
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