Skip to content

Commit

Permalink
Adds a Selector for Bdv Demo
Browse files Browse the repository at this point in the history
Updates bigdataviewer-selector version
  • Loading branch information
NicoKiaru committed May 16, 2024
1 parent 35b9b52 commit 7d25517
Show file tree
Hide file tree
Showing 2 changed files with 52 additions and 1 deletion.
2 changes: 1 addition & 1 deletion pom.xml
Original file line number Diff line number Diff line change
Expand Up @@ -120,7 +120,7 @@
<!-- <scijava.app.directory>C:/Users/nicol/Desktop/fiji-win64-bdv-playground/Fiji.app/</scijava.app.directory> -->

<!-- package version below are not present in the parent pom. A version is needed -->
<bigdataviewer-selector.version>0.2.4</bigdataviewer-selector.version>
<bigdataviewer-selector.version>0.2.6</bigdataviewer-selector.version>
<bigvolumeviewer.version>0.3.3</bigvolumeviewer.version>
<reflections.version>0.10.2</reflections.version> <!-- for test only -->

Expand Down
51 changes: 51 additions & 0 deletions src/test/src/sc/fiji/bdvpg/behaviour/SelectorDemo.java
Original file line number Diff line number Diff line change
@@ -0,0 +1,51 @@
package sc.fiji.bdvpg.behaviour;

import bdv.util.BdvHandle;
import bdv.viewer.SourceAndConverter;
import ch.epfl.biop.bdv.select.SourceSelectorBehaviour;
import org.scijava.Context;
import org.scijava.ui.UIService;
import org.scijava.ui.swing.SwingUI;
import sc.fiji.bdvpg.bdv.navigate.ViewerTransformAdjuster;
import sc.fiji.bdvpg.scijava.services.SourceAndConverterBdvDisplayService;
import sc.fiji.bdvpg.scijava.services.SourceAndConverterService;
import sc.fiji.bdvpg.services.SourceAndConverterServices;
import sc.fiji.bdvpg.sourceandconverter.display.BrightnessAdjuster;
import sc.fiji.bdvpg.spimdata.importer.SpimDataFromXmlImporter;


/**
* Demo of bigdataviewer-selector. Press E to enter into the selector mode.
*/
public class SelectorDemo {

public static void main(String... args) {
// Initializes static SourceService
Context ctx = new Context();
// Show UI
ctx.service(UIService.class).showUI(SwingUI.NAME);

SourceAndConverterBdvDisplayService sourceDisplayService = ctx.getService(SourceAndConverterBdvDisplayService.class);
SourceAndConverterService sourceService = ctx.getService(SourceAndConverterService.class);

// Open two example sources
new SpimDataFromXmlImporter("src/test/resources/mri-stack.xml").get();
new SpimDataFromXmlImporter("src/test/resources/demoSlice.xml").get();

BdvHandle bdvh = sourceDisplayService.getNewBdv();
sourceDisplayService.show(bdvh, sourceService.getSourceAndConverters().toArray(new SourceAndConverter[0]));

new ViewerTransformAdjuster(bdvh, sourceService.getSourceAndConverters().toArray(new SourceAndConverter[0])).run();
new BrightnessAdjuster(sourceService.getSourceAndConverters().get(0),0,255).run();
new BrightnessAdjuster(sourceService.getSourceAndConverters().get(1),0,255).run();

SourceSelectorBehaviour ssb = new SourceSelectorBehaviour(bdvh, "E");

// Stores the associated selector to the display
SourceAndConverterServices.getBdvDisplayService().setDisplayMetadata(bdvh,
SourceSelectorBehaviour.class.getSimpleName(), ssb);

new EditorBehaviourInstaller(ssb, "").run();

}
}

0 comments on commit 7d25517

Please sign in to comment.