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Add paginated annonarse range queries #149

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merged 8 commits into from
Jul 24, 2024

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@gromdimon gromdimon linked an issue Jul 24, 2024 that may be closed by this pull request
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codecov bot commented Jul 24, 2024

Codecov Report

Attention: Patch coverage is 40.00000% with 45 lines in your changes missing coverage. Please review.

Project coverage is 50.25%. Comparing base (90b574d) to head (57d27db).

Additional details and impacted files
@@            Coverage Diff             @@
##             main     #149      +/-   ##
==========================================
- Coverage   52.62%   50.25%   -2.38%     
==========================================
  Files          35       35              
  Lines        3373     3397      +24     
==========================================
- Hits         1775     1707      -68     
- Misses       1598     1690      +92     
Files Coverage Δ
src/criteria/auto_bp7.py 32.29% <100.00%> (ø)
src/defs/annonars_range.py 100.00% <100.00%> (ø)
src/pvs1/seqvar_pvs1.py 51.11% <100.00%> (ø)
src/bench/comparison_v0.py 0.00% <0.00%> (ø)
src/bench/comparison_v1.py 0.00% <0.00%> (ø)
src/criteria/auto_pm1.py 20.00% <0.00%> (ø)
src/criteria/auto_pp2_bp1.py 17.79% <0.00%> (ø)
src/bench/comparison_v2.py 0.00% <0.00%> (ø)
src/api/dotty.py 40.00% <28.57%> (-37.78%) ⬇️
src/bench/comparison_v3.py 0.00% <0.00%> (ø)
... and 2 more

... and 1 file with indirect coverage changes

@gromdimon gromdimon merged commit 2373b0f into main Jul 24, 2024
4 of 5 checks passed
@gromdimon gromdimon deleted the 148-annonars-range-responses-crash-on-large-queries branch July 24, 2024 17:33
gromdimon added a commit that referenced this pull request Aug 2, 2024
* migrate from requests to httpx

* add paginated range endpoint

* replace response to httpx in comparison files

* rename comparison to comparison_v0

* formatting

* old file

* comparison_v3 fix

* minor
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Annonars range responses crash on large queries
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