Add fqgrep

recipes/fqgrep/build.sh

@@ -0,0 +1,11 @@
+#!/bin/bash -e
+
+# TODO: Remove the following export when pinning is updated and we use
+#       {{ compiler('rust') }} in the recipe.
+export \
+    CARGO_NET_GIT_FETCH_WITH_CLI=true \
+    CARGO_HOME="${BUILD_PREFIX}/.cargo"
+
+export BINDGEN_EXTRA_CLANG_ARGS="${CFLAGS} ${CPPFLAGS} ${LDFLAGS}"
+
+cargo install --no-track --verbose --root "${PREFIX}" --path .

recipes/fqgrep/meta.yaml

@@ -0,0 +1,36 @@
+{% set version = "0.1.0" %}
+
+package:
+  name: fqgrep
+  version: {{ version }}
+
+build:
+  number: 0
+
+source:
+  url: https://github.com/fulcrumgenomics/fqgrep/archive/v{{ version }}.tar.gz
+  sha256: 662c5e67cebd9e6d266f201ec45548c903b2f194ad1eb4185f6fe75eed36be9a
+
+requirements:
+  build:
+    - {{ compiler('cxx') }}
+    - rust >=1.60  
+    - pkg-config
+    - make
+    - cmake
+  host:
+  run:
+
+test:
+  commands:
+    - fqgrep --help
+
+about:
+  home: https://github.com/fulcrumgenomics/fqgrep
+  license: MIT
+  license_file: LICENSE
+  summary: Search a pair of fastq files for reads that match a given ref or alt sequence
+
+extra:
+  recipe-maintainers:
+    - nh13