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SpeciesPrimer v2.2-beta.5

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@biologger biologger released this 06 Jul 12:00

New in SpeciesPrimer v2.2-beta.5

  • Updated dependencies
  • Docker runs as user (not root)
    New in SpeciesPrimer v2.2
  • Automatic download of genome assemblies from genbank
  • New filter options for specificity BLAST step
    • Nucleotide identity
    • E-value
  • New functions (experimental)
    • StrainPrimer: strain specific primer design
    • Primer design for viruses (no input QC!)
  • Removed blastdbv5 option
    • v5 BLAST DB is the new standard
    • Taxid filtering is not supported anymore (use customdb instead)
  • Bugfixes