CI & CD #673
test_and_deploy.yml
on: workflow_dispatch
Build CCD and wheel for reusing it in several CI jobs
5m 8s
Generate wheels matrix
8s
Check code style
11s
Build source distribution
25s
Test interfaces to databases and applications
2m 56s
Test interface to Muscle 5
50s
Matrix: Build & Test
Upload documentation to GitHub Releases and documentation website
0s
Upload package to GitHub Releases & PyPI
23s
Annotations
1 error and 27 warnings
Build documentation
Process completed with exit code 2.
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Generate wheels matrix
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Check code style
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build CCD and wheel for reusing it in several CI jobs
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Upload CCD to GitHub Releases
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build source distribution
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Test interface to Muscle 5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Test interface to Muscle 5
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test interfaces to databases and applications
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Test interfaces to databases and applications
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:200: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test interfaces to databases and applications
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test interfaces to databases and applications
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
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Test interfaces to databases and applications
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
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Test interfaces to databases and applications
warning libmamba [expat-2.6.4-h6a678d5_0] The following files were already present in the environment:
- lib/libexpat.so.1
- lib/libexpat.so.1.10.0
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Test interfaces to databases and applications
warning libmamba [gobject-introspection-1.78.1-py312h42194e9_1] The following files were already present in the environment:
- lib/girepository-1.0/GLib-2.0.typelib
- lib/girepository-1.0/GModule-2.0.typelib
- lib/girepository-1.0/GObject-2.0.typelib
- lib/girepository-1.0/Gio-2.0.typelib
- share/gir-1.0/GLib-2.0.gir
- share/gir-1.0/GModule-2.0.gir
- share/gir-1.0/GObject-2.0.gir
- share/gir-1.0/Gio-2.0.gir
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Run benchmarks
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build & Test (cp311-manylinux_x86_64, ubuntu-latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build & Test (cp312-manylinux_x86_64, ubuntu-latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build & Test (cp313-manylinux_x86_64, ubuntu-latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build & Test (cp310-manylinux_x86_64, ubuntu-latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
|
Upload package to GitHub Releases & PyPI
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build documentation
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build documentation
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:200: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Build documentation
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
|
Build documentation
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
|
Build documentation
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
warning libmamba 'repo.anaconda.com', a commercial channel hosted by Anaconda.com, is used.
warning libmamba Please make sure you understand Anaconda Terms of Services.
warning libmamba See: https://legal.anaconda.com/policies/en/
|
Build documentation
warning libmamba [expat-2.6.4-h6a678d5_0] The following files were already present in the environment:
- lib/libexpat.so.1
- lib/libexpat.so.1.10.0
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Build documentation
warning libmamba [gobject-introspection-1.78.1-py312h42194e9_1] The following files were already present in the environment:
- lib/girepository-1.0/GLib-2.0.typelib
- lib/girepository-1.0/GModule-2.0.typelib
- lib/girepository-1.0/GObject-2.0.typelib
- lib/girepository-1.0/Gio-2.0.typelib
- share/gir-1.0/GLib-2.0.gir
- share/gir-1.0/GModule-2.0.gir
- share/gir-1.0/GObject-2.0.gir
- share/gir-1.0/Gio-2.0.gir
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Artifacts
Produced during runtime
Name | Size | |
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ccd
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33 MB |
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internal-build
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51.1 MB |
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release-cp310-macosx_arm64
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36.4 MB |
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release-cp310-macosx_x86_64
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36.6 MB |
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release-cp310-manylinux_x86_64
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49.2 MB |
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release-cp310-win_amd64
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36.4 MB |
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release-cp311-macosx_arm64
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36.4 MB |
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release-cp311-macosx_x86_64
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36.6 MB |
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release-cp311-manylinux_x86_64
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50.1 MB |
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release-cp311-win_amd64
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36.4 MB |
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release-cp312-macosx_arm64
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36.4 MB |
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release-cp312-macosx_x86_64
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36.6 MB |
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release-cp312-manylinux_x86_64
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51.8 MB |
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release-cp312-win_amd64
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36.3 MB |
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release-cp313-macosx_arm64
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release-cp313-macosx_x86_64
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release-cp313-manylinux_x86_64
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51.7 MB |
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release-cp313-win_amd64
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release-sdist
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