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Add turbo color map #1055

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45 changes: 45 additions & 0 deletions blueoil/common.py
Original file line number Diff line number Diff line change
Expand Up @@ -16,8 +16,11 @@
from __future__ import division

import math
import numpy as np
from enum import Enum

from blueoil.turbo_color_map import TURBO_CMAP_DATA


class Tasks(Enum):
CLASSIFICATION = "IMAGE.CLASSIFICATION"
Expand Down Expand Up @@ -57,3 +60,45 @@ def get_color_map(length):
# This function generate arbitrary length color map.
color_map = COLOR_MAP * int(math.ceil(length / len(COLOR_MAP)))
return color_map[:length]


# For replacing the Matplotlib Jet colormap, we use the Turbo color map
# https://ai.googleblog.com/2019/08/turbo-improved-rainbow-colormap-for.html
# The colormap allows for a large number of quantization levels:
# https://github.com/blue-oil/blueoil/tree/master/docs/_static/turbo_cmap.png
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Missing link. Do you have plan to add image to the documentation?

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@iizukak Yes, I will add that image and upload to the commit.


# Referred from the following gist:
# https://gist.github.com/mikhailov-work/ee72ba4191942acecc03fe6da94fc73f
# Copyright 2019 Google LLC.
# SPDX-License-Identifier: Apache-2.0

# Changes:
# 1. Vectorized the implementation using numpy
# 2. Use numpy.modf to get integer and float parts
# 3. Provided an example in comments

def apply_color_map(image):
turbo_cmap_data = np.asarray(TURBO_CMAP_DATA)
x = np.asarray(image)
x = x.clip(0., 1.)

# Use numpy.modf to get the integer and decimal parts of feature values
# in the input feature map (or heatmap) that has to be colored.
# Example:
# >>> import numpy as np
# >>> x = np.array([1.2, 2.3, 4.5, 20.45, 6.75, 8.88])
# >>> f, i = np.modf(x) # returns a tuple of length 2
# >>> print(i.shape, f.shape)
# >>> (6,) (6,)
# >>> print(i)
# >>> [ 1. 2. 4. 20. 6. 8.]
# >>> print(f)
# >>> [0.2 0.3 0.5 0.45 0.75 0.88]
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some lines wouldn't have >>> on the interpreter.

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Got it. Will update that.

f, a = np.modf(x * 255.0)
a = a.astype(int)
b = (a + 1).clip(max=255)
image_colored = (
turbo_cmap_data[a]
+ (turbo_cmap_data[b] - turbo_cmap_data[a]) * f[..., None]
)
return image_colored
279 changes: 279 additions & 0 deletions blueoil/turbo_color_map.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,279 @@
# -*- coding: utf-8 -*-
# Copyright 2020 The Blueoil Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# =============================================================================

# Colormap table taken from the following gist:
# https://gist.github.com/mikhailov-work/ee72ba4191942acecc03fe6da94fc73f
# Copyright 2019 Google LLC.
# SPDX-License-Identifier: Apache-2.0
Comment on lines +17 to +20
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so what's the license of this file? I feel it's weird having two license claims on this file.

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Okay, I will remove the Blueoil LICENSE header, as the table in the file is from the gist so I'll put these four lines at the top.


TURBO_CMAP_DATA = [
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Ah, I get it. That will make sure the tests will pass (the ones that have failed, because the symlinks are missing there).

Thank you!!

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Same as above.

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]
Binary file added docs/_static/turbo_cmap.png
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1 change: 1 addition & 0 deletions output_template/python/blueoil/turbo_color_map.py