use latest version of fermilite jni

[tedsharpe]

No description provided.

[mwalker174]

It looks like there's some minor refactoring in your new graph handler. I'm not a real stickler about sneaking that in but just want to check it was intentional.

[codecov-io]

Codecov Report

Merging #4622 into master will increase coverage by 0.005%.
The diff coverage is 70%.

@@              Coverage Diff               @@
##              master    #4622       +/-   ##
==============================================
+ Coverage     79.875%   79.88%   +0.005%     
+ Complexity     17138    17132        -6     
==============================================
  Files           1067     1067               
  Lines          62302    62292       -10     
  Branches       10108    10105        -3     
==============================================
- Hits           49764    49759        -5     
+ Misses          8600     8596        -4     
+ Partials        3938     3937        -1

Impacted Files	Coverage Δ	Complexity Δ
...ls/spark/sv/evidence/FermiLiteAssemblyHandler.java	85.813% <70%> (-0.14%)	79 <0> (-8)
...utils/smithwaterman/SmithWatermanIntelAligner.java	90% <0%> (+40%)	3% <0%> (+2%)	⬆️

[SHuang-Broad]

👍

[tedsharpe]

Thanks, Mark. Yes, intentional. We moved a couple of methods that we more naturally methods on the assembled objects rather than statics in client code at Chris' suggestion. Part of the API upgrade, from my point of view.

[mwalker174]

Looks good