Add properties to show selected columns in mutations table on init

cBioPortal · Dec 7, 2022 · 30701ef · 30701ef
1 parent 67ca9c9
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diff --git a/docs/deployment/customization/portal.properties-Reference.md b/docs/deployment/customization/portal.properties-Reference.md
@@ -191,6 +191,15 @@ Namespace columns are custom columns in the MAF file that can be shown in Mutati
 skin.mutation_table.namespace_column.show_by_default=
 ```
 
+### Default visible columns on init in Mutations Table
+
+Define the columns that are going to be visible in the Mutation Table on the Patient View and the Results View. If namespace columns are set to visible by default, they will also be shown.
+
+```
+# skin.patient_view.mutation_table.columns.show_on_init=
+# skin.results_view.mutation_table.columns.show_on_init=
+```
+
 ### Hide p- and q-values in survival types table
 
 ```

diff --git a/portal/src/main/webapp/config_service.jsp b/portal/src/main/webapp/config_service.jsp
@@ -139,6 +139,8 @@
             "skin.geneset_hierarchy.default_gsva_score",
             "skin.geneset_hierarchy.collapse_by_default",
             "skin.mutation_table.namespace_column.show_by_default",
+            "skin.patient_view.mutation_table.columns.show_on_init",
+            "skin.results_view.mutation_table.columns.show_on_init",
             "comparison.categorical_na_values",
             "skin.hide_download_controls"
         };

diff --git a/src/main/resources/portal.properties.EXAMPLE b/src/main/resources/portal.properties.EXAMPLE
@@ -93,6 +93,10 @@ skin.study_view.link_text=To build your own case set, try out our enhanced Study
 # controls whether namespace columns of the MAF file are immediately visible in mutation tables (default is 'false')
 # skin.mutation_table.namespace_column.show_by_default=true
 
+# controls which columns from the mutation tables are immediately visible in mutation tables
+# skin.patient_view.mutation_table.columns.show_on_init=Gene,Protein Change,Annotation,Mutation Type,Copy #,Cosmic,# Mut in Sample
+# skin.results_view.mutation_table.columns.show_on_init=Sample Id,Protein Change,Annotation,Mutation Type,Copy #,Cosmic,# Mut in Sample
+
 # setting controlling the home page
 ## enable this to show studies for which the user does not have permission (will appear greyed out and cannot be analyzed in study view or results view). 
 # skin.home_page.show_unauthorized_studies=false