musicatk v2.0.0

• Restructure of the musica class to contain mutational signature discovery and prediction results, thus eliminating the need for the musica_result class.
• Added new functionality to help determine the correct number of signatures to predict (k-value).
• Musica objects can be created from variants or directly from count tables.

musicatk v1.14.0

• Updated version number to match Bioconductor
• Fixed some minor bugs and dependencies

musicatk v1.10.0

• Updated version number to match Bioconductor

musicatk v1.8.0

• Updated version number to match Bioconductor

musicatk v1.2.1

• Fixed bug in fonts for some plots
• Added documentation site generated with pkgdown
• Added Shiny UI for interactive analysis of mutational signatures

Initial Release

Initial release of musicatk, which input from multiple file types, complete table building of SBS, DBS, and IND, prediction and discovery of results using NMF and LDA, and multiple visualization and analysis including UMAP, heatmaps, clustering.

Initial Release

Initial release of musicatk, which input from multiple file types, complete table building of SBS, DBS, and IND, prediction and discovery of results using NMF and LDA, and multiple visualization and analysis including UMAP, heatmaps, clustering.