Incorporate additional ontologies into DICOM SNOMED to NCIt mapping

[balhoff]

In #7 @gaurav implemented incorporating of additional ontologies into the mapping tool. This ticket covers adding two additional ontologies:

• RadLex (see Ensure coverage of mappings from SNOMED terms in DICOM to NCIt operations#48 (comment))
• AGROVOC

[decorons]

Why Agrovoc? Doesn't seem needed for Cancer related things?

[decorons]

Also, FYI, RadLex is also in NCI Meta, so has been 'mapped' to other UMLS terminologies

[balhoff]

Why Agrovoc? Doesn't seem needed for Cancer related things?

@gaurav what was that for? I just copied those tasks over from the previous issue.

[gaurav]

I've been looking through my notes, and I'm not sure why I added AGROVOC to this list -- I suspect I heard about it in the context of SKOSMOS, and accidentally put it into this issue rather than one related to vocabulary visualization. I'll take it off the list here.

Since we've already included RadLex (via the BioPortal search API, see #21), I'll close this issue.

[decorons]

Thanks. Probably Harold wanted it as a test because he knows it well. Sherri From: Gaurav Vaidya <[email protected]> Date: Monday, November 9, 2020 at 12:16 PM To: cancerDHC/tools <[email protected]> Cc: De Coronado, Sherri (NIH/NCI) [E] <[email protected]>, Comment <[email protected]> Subject: Re: [cancerDHC/tools] Incorporate additional ontologies into DICOM SNOMED to NCIt mapping (#19) I've been looking through my notes, and I'm not sure why I added AGROVOC to this list -- I suspect I heard about it in the context of SKOSMOS<http://skosmos.org/>, and accidentally put it into this issue rather than one related to vocabulary visualization. I'll take it off the list here. Since we've already included RadLex (via the BioPortal search API, see #21<https://github.com/cancerDHC/tools/issues/21>), I'll close this issue. — You are receiving this because you commented. Reply to this email directly, view it on GitHub<#19 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/ABVZR4BPTLQTH75OLD2POELSPAPURANCNFSM4SPQLEGA>.