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Resolving indel fixes.#448

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holtgrewe merged 7 commits intodevelopcharite/jannovar:developfrom feature/indel-transcript-fix-447charite/jannovar:feature/indel-transcript-fix-447Copy head branch name to clipboardMay 23, 2019

+2,187-134

Commits

Commits on May 21, 2019

• Introducing code for representing gaps and alignments.

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  854744b

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• Rebuilding the example databases for the new data structure.

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• Parsing out the alignment parts from RefSeq.

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• Adding curated example data set for LTBP4 from RefSeq.

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• Point of return for tests with curated LTBP4 data set.

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Commits on May 22, 2019

• Building transcripts with indels including tests.

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Commits on May 23, 2019

• Adding tests for fixing predictions on transcripts with indels.

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