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Version 0.2.7 #223

Merged
merged 44 commits into from
Dec 29, 2023
Merged

Version 0.2.7 #223

merged 44 commits into from
Dec 29, 2023

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cnellington
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@cnellington cnellington commented Dec 29, 2023 •
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Package

  • Added linear encoders with encoder_type='linear'
  • Fixed an issue with easy Bayesian networks error computation
  • Resolved a bug with distributed training on GPUs for the dags TensorDataset
  • Silenced pytorch logging without verbose=True
  • Added stable versions to all requirements, upgrading to torch >=2.1.0 and lightning >=2.0.0, Python >=3.8
  • Added contextualized benefits demo to website tutorial, began work on robustness to outliers demo

Development

  • Added API reference and search to online documentation
  • Depreciating dev branch, using pypi for stable versioning and main branch for active development
  • Added tests for correctness, where models must recover known known data generation mechanisms to pass (not just converging on random data)
  • Formatted all code to black style
  • Added resources and scripts to standardize development workflows and requirements. Began adding typing and docstrings as standard practices. Docstrings use Google style now.

cnellington and others added 30 commits March 6, 2023 12:23
@cnellington
add initial readthedocs config
2cb66a2
@cnellington
add initial notebooks to readthedocs
c53422a
@cnellington
add notebooks
45aa124
@cnellington
add nb rendering requirements for readthedocs
6280b67
@blengerich
bump pytorch-lightning to v2.0.0, make NOTMAD compatible, rerun doc n…
5cda594 
…otebooks
@cnellington
remove torch version requirement, fix base_model and base_predictor t…
5e3861d 
…o run on GPUs
@cnellington
resolved distributed training bug with tensordataset, removed deprici…
e9a6f59 
…ated trainer.tune()
@cnellington
Replaced trainer.tune() with LearningRateFinder callback
8d93338
@cnellington
removed extra callbacks kwarg
eaf2b97
@cnellington
re-added some nonlinear effects to dags tests
9095480
@cnellington
ran black on all modules except easy
22babe3
@cnellington
Merge pull request #201 from cnellington/upgrade-lightning-docs
f9521d1 
Bump pytorch-lightning to v2.0.0, make NOTMAD compatible, rerun doc notebooks
@aaron10l
create linear encoder class
a7e6e70
@cnellington
fix merge conflicts
cdfc297
@cnellington
Merge branch 'aaron10l-97/linear-encoder' into dev
e229b2d
@cnellington
use dag_pred_np for bn errors
3ad9455
@cnellington
Merge pull request #211 from cnellington/easy_bn_mses_simplified
b9d5b39 
use dag_pred_np for bn errors
@aaron10l
create robust outliers demo notebook
308d6a5
@aaron10l
update contributors
7c0331d
@blengerich
Merge pull request #214 from aaron10l/157/robust-outliers
32e44c5 
157/robust outliers
@blengerich
add robustness demo to website
3f3da97
@cnellington
remove pytorch logging
be6eb42
@cnellington
Merge pull request #215 from cnellington/outlier-demo
9ff8ff3 
Outlier demo
@cnellington
Merge pull request #217 from cnellington/main
2d7262b 
Merge main updates into dev
@blengerich
split demos and models
5d038c9
@blengerich
rename benefits notebook
67c29a7
@cnellington
Merge pull request #219 from cnellington/organize-demos
de646db 
split demos and models
@cnellington
Merge branch 'dev' of https://github.com/cnellington/Contextualized i…
5e9bbcc 
…nto readthedocs
@cnellington
working autodoc with jupyter-book, upgraded versions of sphinx and ju…
b60cfe1 
…pyter-book to enable search
@cnellington
docs for easy module
c9b3702
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@cnellington cnellington merged commit df28843 into main Dec 29, 2023
3 of 6 checks passed
@cnellington cnellington deleted the dev branch December 29, 2023 23:15
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3 participants
@cnellington @blengerich @aaron10l