Feature/snakemake workflow template #222
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Allow to dynamically load crate generators from submodules of the generators package
It is based on the recommended best practices for Snakemake workflows
We need to check whether the integration works even without generating the repo from the Github template
kikkomep
changed the title
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Why 16 separate commits? Can't the bot add all files in a single commit? |
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Sure, it can and it's an important optimisation. |
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As a result of some experiments, adding all files in single commit seems to be less efficient than having a single file per commit. So, we decided to keep the current implementation |
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This PR extends the Github app with the ability to initialise a Github repository to host a Snakemake workflow according to the Snakemake best practices. Thanks to the repo2crate tool (which generates all the required RO-Crate metadata for the workflow), the resulting repository is compliant with the Workflow Testing RO-Crate specification.
An interactive wizard guides users through the initial configuration: