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1. ISVdb ISVdb Public

   Code to support 'Inbred Strain Variant Database (ISVdb): A Repository for Probabilistically Informed Sequence Differences Among the Collaborative Cross Strains and Their Founders' (Daniel Oreper, Y…

   Python 2 1

2. mnp2018 mnp2018 Public

   Code to generate results for 'Reciprocal F1 hybrids of two inbred mouse strains reveal parent-of-origin and perinatal diet effects on behavior and expression' (Oreper, Schoenrock, 2018)

   R 1

3. danoreper.github.io danoreper.github.io Public

   HTML

4. ovx2016 ovx2016 Public

   Code for analyses in "Ovariectomy results in inbred strain-specific increases in anxiety-like behavior in mice." ( Schoenrock, Oreper, 2016)

   R

5. exit exit Public

   Forked from gomezlab/exit

   Code to support seq pipeline for "The EXIT Strategy: an Approach for Identifying Bacterial Proteins Exported during Host Infection" (Perkowski et. al. 2016)

   R

6. ovx.demo ovx.demo Public

   Demo code drawn from my analysis of ovariectomy data (see https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5289389/), focusing on a single analysis. Intended to demonstrate Bayesian modeling of strain-…

   R