remove get_first_env_var for yacman update

databio · Oct 14, 2023 · 9ebd38d · 9ebd38d
1 parent 9864730
commit 9ebd38d
Showing 1 changed file with 2 additions and 6 deletions.
diff --git a/bedhost/cli.py b/bedhost/cli.py
@@ -1,5 +1,5 @@
 from ubiquerg import VersionInHelpParser
-from yacman import get_first_env_var
+from yacman import select_config
 
 
 def build_parser():
@@ -8,11 +8,7 @@ def build_parser():
 
     :return argparse.ArgumentParser
     """
-    env_var_val = (
-        get_first_env_var(CFG_ENV_VARS)[1]
-        if get_first_env_var(CFG_ENV_VARS) is not None
-        else "not set"
-    )
+    env_var_val = select_config(config_env_vars=CFG_ENV_VARS)
     banner = "%(prog)s - REST API for the bedstat pipeline produced statistics"
     additional_description = (
         "For subcommand-specific options, type: '%(prog)s <subcommand> -h'"