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🪄 Create rich visualizations with AI

TypeScript 7,701 577 Updated Feb 20, 2025

A simple screen parsing tool towards pure vision based GUI agent

Jupyter Notebook 14,157 1,067 Updated Feb 18, 2025

CHARMM and AMBER forcefields for OpenMM (with small molecule support)

Python 274 82 Updated Feb 10, 2025

Finetune Llama 3.3, DeepSeek-R1 & Reasoning LLMs 2x faster with 70% less memory! 🦥

Python 30,735 2,040 Updated Feb 20, 2025

Fully open reproduction of DeepSeek-R1

Python 20,723 1,808 Updated Feb 19, 2025

s1: Simple test-time scaling

Python 5,498 621 Updated Feb 20, 2025

Local CLI Copilot, powered by Ollama. 💻🦙

Go 1,370 44 Updated Feb 13, 2025

PaSa -- an advanced paper search agent powered by large language models. It can autonomously make a series of decisions, including invoking search tools, reading papers, and selecting relevant refe…

Python 844 60 Updated Feb 7, 2025

An open library for the analysis of molecular dynamics trajectories

Python 620 283 Updated Feb 18, 2025

AI-powered ab initio biomolecular dynamics simulation

Python 464 58 Updated Feb 18, 2025

Force fields produced by the Open Force Field Initiative

Python 145 24 Updated Jan 7, 2025

Novana is a cheminformatics tool that extends the decomposition of molecules into Bemis-Murcko frameworks.

Python 50 6 Updated Feb 1, 2025

[arXiv 2025] Official pytorch implementation of "FramePainter: Endowing Interactive Image Editing with Video Diffusion Priors"

Python 345 10 Updated Jan 25, 2025

Run OpenMM with forces provided by any Python program

C++ 30 1 Updated Dec 25, 2024

Public repo for DeepLearning.AI MLEP Specialization

Jupyter Notebook 1,874 2,362 Updated Oct 28, 2024

The Open Forcefield Toolkit provides implementations of the SMIRNOFF format, parameterization engine, and other tools. Documentation available at http://open-forcefield-toolkit.readthedocs.io

Python 327 95 Updated Feb 14, 2025

Simple protein-ligand complex simulation with OpenMM

Python 4 3 Updated Apr 4, 2024

Taming Stable Diffusion for Lip Sync!

Python 2,553 374 Updated Jan 19, 2025

newspaper3k is a news, full-text, and article metadata extraction in Python 3. Advanced docs:

Python 14,369 2,120 Updated Jul 23, 2024

Plugin for folding sequences directly in PyMOL

Jupyter Notebook 84 16 Updated Feb 11, 2025

Simple protein-ligand complex simulation with OpenMM

Python 80 17 Updated Sep 6, 2023

BPL is an Python app to solve Loop Closure Problems.

Python 4 1 Updated Jan 21, 2022

Cyclic Coordinate Descent algorithm for protein loop closure.

Python 2 3 Updated Feb 21, 2016

Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop

Python 11 2 Updated Jun 9, 2024

Milvus is a high-performance, cloud-native vector database built for scalable vector ANN search

Go 32,548 3,035 Updated Feb 19, 2025

KAG is a logical form-guided reasoning and retrieval framework based on OpenSPG engine and LLMs. It is used to build logical reasoning and factual Q&A solutions for professional domain knowledge ba…

Python 5,283 340 Updated Feb 19, 2025

Protein and nucleic acid validation service

Perl 68 30 Updated Mar 7, 2024

Document to Markdown OCR library with Llama 3.2 vision

TypeScript 2,173 201 Updated Jan 20, 2025

User friendly and accurate binder design pipeline

Python 445 88 Updated Jan 2, 2025
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