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EMNLP'22 | MedCLIP: Contrastive Learning from Unpaired Medical Images and Texts
Agentic components of the Llama Stack APIs
[Arxiv-2024] CheXagent: Towards a Foundation Model for Chest X-Ray Interpretation
Get up and running with Llama 3.3, DeepSeek-R1, Phi-4, Gemma 2, and other large language models.
Redes Neurais e Aprendizado Profundo de Máquina
TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.
Sample Orthanc deployments and scripts
Tool to anonymize DICOM files according to the DICOM standard
MEDPSeg: Official implementation of Modified EfficientDet for Pulmonary Polymorphic Segmentation
Scrollable textbox component for Streamlit.
A collection of code snippets for my PyTorch Lightning projects
Automatic Journal Title Abbreviation Package for LaTeX
[MedIA 2023/MICCAI 2022 Grand Challenge]: Airway Tree Modeling (ATM'22) Related Work Collections, also includes the state-of-the-art works on pulmonary airway segmentation and related works.
The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
Official repository for reproducing COVID and Lung segmentation prediction (old version of MEDPSeg)
Git Source Code Mirror - This is a publish-only repository but pull requests can be turned into patches to the mailing list via GitGitGadget (https://gitgitgadget.github.io/). Please follow Documen…
Codebase and pretrained models for ECCV'18 Unified Perceptual Parsing
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
An Introduction Tutorial to Medical Imaging Segmentation with Deep Learning
Nuitka is a Python compiler written in Python. It's fully compatible with Python 2.6, 2.7, 3.4-3.13. You feed it your Python app, it does a lot of clever things, and spits out an executable or exte…
Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)
A simple function to simplify boolean algebra expressions, inspired by Karnaugh Map.
Radiology Objects in COntext (ROCO): A Multimodal Image Dataset
The standard data-centric AI package for data quality and machine learning with messy, real-world data and labels.
Official Pytorch Code for "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" - MICCAI 2021