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1. TreeHiC TreeHiC Public

   An implementation of a hierarchical testing for identifying differential interactions from HiC data

   R

2. tan tan Public

   An implementation of the Adaptive Neyman test for ChIP-seq differential analysis

   HTML 1

3. tanExample tanExample Public

   Example data for the tan package

   R

4. tan-coverage tan-coverage Public

   A package to obtain read coverage over the genomic regions

   R

5. VersionControlSystem VersionControlSystem Public

   A (minimal) program written in JAVA to emulate version control system

   Java

6. bioinformatics-from-scratch bioinformatics-from-scratch Public

   Code bioinformatics and machine learning algorithms from scratch from (1) publications, (2) graduate classes taken at UW-Madison

   Python