MetaShARK_docker

Docker repository for MetaShARK.

• Link to MetaShARK's main github
• Link to MetaShARK's dockerhub

Server setup

Server setup tests have been done within Genostack scope. Here are the followed steps:

0. Create a genouest.org account (https://genostack.genouest.org/)
1. Access your dashboard.
2. Launch a new instance with following specs:

• Ubuntu 18.04
• >= 8 Go RAM and 20 Go Memory

3. Edit security group with rule Ingress IPv4 TCP 3838 0.0.0.0/0 -
4. Edit VM proxy Rules:

• From / to <your_ip>:3838/
• Enable "web socket" option

Dockerize the app

1. Connect to genossh.genouest.org, and then to your VM as root user (see Genostack's guide)
2. Install Docker (snap install docker)
3. Clone this git repository.
4. Build the MetaShARK docker image with:

docker build -t metashark MetaShARK_docker/

This step might take several minutes.
5. Launch the app with:

docker run -d --rm -p 3838:3838 --name MetaShARK_dockerized metashark